RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 ADAMTS4O75173 837 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 TDP2O95551 362 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 CEP55Q53EZ4 464 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 LARP1BQ659C4 914 aaKnown RBP10.36□□□□□ -0.75
PDE4D-201ENST00000309641 TLK2Q86UE8 772 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 TEX2Q8IWB9 1127 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 GJA10Q969M2 543 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 LENG9Q96B70 501 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 JADE2Q9NQC1 790 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 CCDC194A0A1B0GVG4 234 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 MEIS1O00470 390 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 CYP3A4P08684 503 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 C6orf222P0C671 652 aaPredicted RBP10.36□□□□□ -0.75
PDE4D-201ENST00000309641 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
PDE4D-201ENST00000309641 ARHGAP1Q07960 439 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 TTLL4Q14679 1199 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 NONOQ15233 471 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDE4D-201ENST00000309641 LRRC41Q15345 812 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 XRRA1Q6P2D8 792 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 KRT25Q7Z3Z0 450 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 EHMT1Q9H9B1 1298 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 KCNH7Q9NS40 1196 aa10.36□□□□□ -0.75
PDE4D-201ENST00000309641 FIBPO43427 364 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 MSCO60682 206 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 SYT1P21579 422 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 ICAM3P32942 547 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 ZNF76P36508 570 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 MTMR1Q13613 665 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 LETM2Q2VYF4 491 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 GNPTABQ3T906 1256 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 PRR16Q569H4 304 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 BRMS1Q9HCU9 246 aa10.35□□□□□ -0.75
PDE4D-201ENST00000309641 SLC37A4O43826 429 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 STAM2O75886 525 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 GGPS1O95749 300 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 HSP90AA1P07900 732 aaKnown RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 KCNA2P16389 499 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 U2AF2P26368 475 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■□□ 16.3
PDE4D-201ENST00000309641 CIITAP33076 1130 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 GJA9P57773 515 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 SP4Q02446 784 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 ITGB3BPQ13352 177 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 PKP1Q13835 747 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 NBR1Q14596 966 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 SAFBQ15424 915 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 HSDL1Q3SXM5 330 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 MCTP1Q6DN14 999 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 CCSAPQ6IQ19 270 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 FERMT3Q86UX7 667 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 KLHDC9Q8NEP7 349 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 OR6J1Q8NGC5 347 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 AFG1LQ8WV93 481 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 GPRASP2Q96D09 838 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 UPF3AQ9H1J1 476 aaKnown RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 H3BQV1 296 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 USP11P51784 963 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 KCNA10Q16322 511 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 CELF3Q5SZQ8 465 aaKnown RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 IFFO2Q5TF58 517 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 MYSM1Q5VVJ2 828 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 NEK8Q86SG6 692 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 NLRX1Q86UT6 975 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 FERMT2Q96AC1 680 aa10.34□□□□□ -0.75
PDE4D-201ENST00000309641 PAWRQ96IZ0 340 aaKnown RBP10.34□□□□□ -0.75
PDE4D-201ENST00000309641 CYP3A7-CYP3A51PA0A087WV96 503 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 CCNT1O60563 726 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 FARP2O94887 1054 aaPredicted RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 GH1P01241 217 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 TGFB3P10600 412 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 CYP3A7P24462 503 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 UBE2Q1Q7Z7E8 422 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 AGO4Q9HCK5 861 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 DDX39AO00148 427 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 MSH4O15457 936 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 ASGR1P07306 291 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
PDE4D-201ENST00000309641 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 CXCL17Q6UXB2 119 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 SPATA33Q96N06 139 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 AP5M1Q9H0R1 490 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
PDE4D-201ENST00000309641 A6NJR5 290 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 DNM1LO00429 736 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms