RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 CXCL17Q6UXB2 119 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 MTG1Q9BT17 334 aaPredicted RBP22.63■■□□□ 1.21
VEGFB-201ENST00000309422 PCDHA4Q9UN74 947 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 TLR3O15455 904 aaKnown RBP22.62■■□□□ 1.21
VEGFB-201ENST00000309422 MAFGO15525 162 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 UBA1P22314 1058 aaKnown RBP22.62■■□□□ 1.21
VEGFB-201ENST00000309422 ICAM3P32942 547 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 SREBF1P36956 1147 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 MRPS9P82933 396 aaKnown RBP22.62■■□□□ 1.21
VEGFB-201ENST00000309422 C1orf53Q5VUE5 145 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 COPS5Q92905 334 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 EMID1Q96A84 441 aaPredicted RBP22.62■■□□□ 1.21
VEGFB-201ENST00000309422 PGBD1Q96JS3 809 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 SPATA33Q96N06 139 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 KATNAL1Q9BW62 490 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 BACH2Q9BYV9 841 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 PRDM5Q9NQX1 630 aaPredicted RBP22.62■■□□□ 1.21
VEGFB-201ENST00000309422 KIF3AQ9Y496 699 aa22.62■■□□□ 1.21
VEGFB-201ENST00000309422 DCDC2CA8MYV0 355 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 PQBP1O60828 265 aaKnown RBP22.61■■□□□ 1.21
VEGFB-201ENST00000309422 ARHGAP1Q07960 439 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 TRIM60Q495X7 471 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 CCSAPQ6IQ19 270 aaPredicted RBP22.61■■□□□ 1.21
VEGFB-201ENST00000309422 PPTC7Q8NI37 304 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 AFG1LQ8WV93 481 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 ZFP91Q96JP5 570 aaPredicted RBP22.61■■□□□ 1.21
VEGFB-201ENST00000309422 ALG1Q9BT22 464 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 TMEM260Q9NX78 707 aa22.61■■□□□ 1.21
VEGFB-201ENST00000309422 A6NJR5 290 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 LARGE1O95461 756 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 MMP3P08254 477 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 CLK2P49760 499 aaKnown RBP22.6■■□□□ 1.21
VEGFB-201ENST00000309422 HMGN5P82970 282 aaKnown RBP22.6■■□□□ 1.21
VEGFB-201ENST00000309422 ARHGAP4P98171 946 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
VEGFB-201ENST00000309422 SNX17Q15036 470 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 CELF3Q5SZQ8 465 aaKnown RBP22.6■■□□□ 1.21
VEGFB-201ENST00000309422 METTL7BQ6UX53 244 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 FAM184AQ8NB25 1140 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 SDF4Q9BRK5 362 aa22.6■■□□□ 1.21
VEGFB-201ENST00000309422 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
VEGFB-201ENST00000309422 SPATA31C2B4DYI2 1134 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 CEP55Q53EZ4 464 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 TMEM63BQ5T3F8 832 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 BLIDQ8IZY5 108 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 KIF2CQ99661 725 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 LBHD1Q9BQE6 289 aaPredicted RBP22.59■■□□□ 1.21
VEGFB-201ENST00000309422 SENP7Q9BQF6 1050 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 JADE2Q9NQC1 790 aa22.59■■□□□ 1.21
VEGFB-201ENST00000309422 CCDC194A0A1B0GVG4 234 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 CTAGE5O15320 804 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 RGS20O76081 388 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 CHMP4BP1P59074 171 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 SAFBQ15424 915 aaKnown RBP eCLIP22.58■■□□□ 1.21
VEGFB-201ENST00000309422 FAM47CQ5HY64 1035 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 KRT25Q7Z3Z0 450 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 DAGLBQ8NCG7 672 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 NSUN7Q8NE18 718 aaKnown RBP22.58■■□□□ 1.21
VEGFB-201ENST00000309422 MXRA8Q9BRK3 442 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 UBIAD1Q9Y5Z9 338 aa22.58■■□□□ 1.21
VEGFB-201ENST00000309422 ARVCFO00192 962 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 SORBS3O60504 671 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 CLTBP09497 229 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 PTGS1P23219 599 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 IRX5P78411 483 aaPredicted RBP22.57■■□□□ 1.2
VEGFB-201ENST00000309422 PURAQ00577 322 aaKnown RBP22.57■■□□□ 1.2
VEGFB-201ENST00000309422 ITGA7Q13683 1181 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 MYSM1Q5VVJ2 828 aa22.57■■□□□ 1.2
VEGFB-201ENST00000309422 MKI67P46013 3256 aaKnown RBP22.57■■□□□ 1.2
VEGFB-201ENST00000309422 H0YGN5 161 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 KRT2P35908 639 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 CYFIP1Q7L576 1253 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 RASGRP4Q8TDF6 673 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 TOX2Q96NM4 488 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 PKD2L1Q9P0L9 805 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 ZNF215Q9UL58 517 aaPredicted RBP22.56■■□□□ 1.2
VEGFB-201ENST00000309422 ZMYND8Q9ULU4 1186 aaPredicted RBP22.56■■□□□ 1.2
VEGFB-201ENST00000309422 NOD1Q9Y239 953 aa22.56■■□□□ 1.2
VEGFB-201ENST00000309422 ITGB5P18084 799 aa22.55■■□□□ 1.2
VEGFB-201ENST00000309422 SP4Q02446 784 aa22.55■■□□□ 1.2
VEGFB-201ENST00000309422 TLE2Q04725 743 aa22.55■■□□□ 1.2
VEGFB-201ENST00000309422 NONOQ15233 471 aaKnown RBP eCLIP22.55■■□□□ 1.2
VEGFB-201ENST00000309422 NIPA1Q7RTP0 329 aa22.55■■□□□ 1.2
VEGFB-201ENST00000309422 AIFM3Q96NN9 605 aa22.55■■□□□ 1.2
VEGFB-201ENST00000309422 PPFIA4O75335 1185 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 CTDNEP1O95476 244 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 GNL2Q13823 731 aaKnown RBP22.54■■□□□ 1.2
VEGFB-201ENST00000309422 ANKRD33Q7Z3H0 272 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 PLA2G4DQ86XP0 818 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 NAP1L4Q99733 375 aaKnown RBP22.54■■□□□ 1.2
VEGFB-201ENST00000309422 PHF20Q9BVI0 1012 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 JPH1Q9HDC5 661 aaPredicted RBP22.54■■□□□ 1.2
VEGFB-201ENST00000309422 KCNH7Q9NS40 1196 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 TMEM39AQ9NV64 488 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 KCNJ14Q9UNX9 436 aa22.54■■□□□ 1.2
VEGFB-201ENST00000309422 JAK2O60674 1132 aa22.53■■□□□ 1.2
VEGFB-201ENST00000309422 CYP3A4P08684 503 aa22.53■■□□□ 1.2
VEGFB-201ENST00000309422 SUPT20HL2P0C7V6 817 aa22.53■■□□□ 1.2
VEGFB-201ENST00000309422 C7orf31Q8N865 590 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms