RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CRISPLD2Q9H0B8 497 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 AP5M1Q9H0R1 490 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 XPNPEP3Q9NQH7 507 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 RTEL1Q9NZ71 1219 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 OGDHLQ9ULD0 1010 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 ADAMTS3O15072 1205 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 STX6O43752 255 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 GH1P01241 217 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 SMPD1P17405 629 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 LAMC2Q13753 1193 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 LHX8Q68G74 356 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 U2AF1L4Q8WU68 220 aaKnown RBP20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 PDGFCQ9NRA1 345 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 KCNH7Q9NS40 1196 aa20.33■□□□□ 0.85
SSSCA1-201ENST00000309328 VPS37CA5D8V6 355 aaPredicted RBP20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 ZEB2O60315 1214 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 CPT1AP50416 773 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 GJA9P57773 515 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 LETM2Q2VYF4 491 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 TLK2Q86UE8 772 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 PLA2G4DQ86XP0 818 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 MBOAT7Q96N66 472 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 ZSCAN16Q9H4T2 348 aaPredicted RBP20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 TCEAL9Q9UHQ7 104 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 LRRC37A2A6NM11 1700 aa20.32■□□□□ 0.84
SSSCA1-201ENST00000309328 IGLV3-22A0A075B6J6 115 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 TBX3O15119 743 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 CST5P28325 142 aaPredicted RBP20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 PRR16Q569H4 304 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 METTL7BQ6UX53 244 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 PCSK9Q8NBP7 692 aaKnown RBP20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 SDF4Q9BRK5 362 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 TBC1D22BQ9NU19 505 aa20.31■□□□□ 0.84
SSSCA1-201ENST00000309328 NFASCO94856 1347 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 DNM1LO00429 736 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 CCNT1O60563 726 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 KPNA6O60684 536 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 TFRCP02786 760 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 UBA1P22314 1058 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 DHX37Q8IY37 1157 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 OR6J1Q8NGC5 347 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 FAM20AQ96MK3 541 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 TSEN34Q9BSV6 310 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 MLXIPQ9HAP2 919 aa20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 AGO4Q9HCK5 861 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 DDX25Q9UHL0 483 aaKnown RBP20.3■□□□□ 0.84
SSSCA1-201ENST00000309328 SYNRGQ9UMZ2 1314 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 ARIH2O95376 493 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 FSCN1Q16658 493 aaKnown RBP20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 LY6KQ17RY6 165 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 PPTC7Q8NI37 304 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 RIT2Q99578 217 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
SSSCA1-201ENST00000309328 MOXD2PA6NHM9 499 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 A6NJR5 290 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 KBTBD13C9JR72 458 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 NOP56O00567 594 aaKnown RBP20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 ADAMTS4O75173 837 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 GGPS1O95749 300 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 C6orf222P0C671 652 aaPredicted RBP20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 KCNA2P16389 499 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 SEMA3FQ13275 785 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 EARS2Q5JPH6 523 aaKnown RBP20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 MYSM1Q5VVJ2 828 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 SLFN12Q8IYM2 578 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 CYP2W1Q8TAV3 490 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 LENG9Q96B70 501 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 MTMR6Q9Y217 621 aa20.28■□□□□ 0.84
SSSCA1-201ENST00000309328 MCM3APO60318 1980 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 KIF28PB7ZC32 967 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 ADCY6O43306 1168 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 NEMFO60524 1076 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 CABYRO75952 493 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 TDP2O95551 362 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 BMP15O95972 392 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 LRRC41Q15345 812 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 KLHDC9Q8NEP7 349 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 SPATA33Q96N06 139 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 SEZ6LQ9BYH1 1024 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 JPH1Q9HDC5 661 aaPredicted RBP20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
SSSCA1-201ENST00000309328 CCDC85CA6NKD9 419 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 LAD1O00515 517 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 PPFIA4O75335 1185 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms