RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 USP17L18D6R9N7 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L22D6RA61 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L17D6RBQ6 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L19D6RCP7 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L20D6RJB6 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 UBAP1LF5GYI3 381 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 HNRNPH3P31942 346 aaKnown RBP23.09■■□□□ 1.29
RELA-201ENST00000308639 ACTN2P35609 894 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 GABPAQ06546 454 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L24Q0WX57 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 TMEM119Q4V9L6 283 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L6PQ6QN14 398 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 CERS5Q8N5B7 392 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 SELENOOQ9BVL4 669 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 TRAF5O00463 557 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 PPP1R2P41236 205 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 MAGEA1P43355 309 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 IRX3P78415 501 aaPredicted RBP23.09■■□□□ 1.29
RELA-201ENST00000308639 EHHADHQ08426 723 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 ZNF543Q08ER8 600 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 CRY2Q49AN0 593 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 MTMR8Q96EF0 704 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USO1O60763 962 aaKnown RBP23.08■■□□□ 1.29
RELA-201ENST00000308639 TACC1O75410 805 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 GYS1P13807 737 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 GGCXP38435 758 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 ASPRV1Q53RT3 343 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 TDRD12Q587J7 1177 aaKnown RBP23.08■■□□□ 1.29
RELA-201ENST00000308639 CCNI2Q6ZMN8 369 aaPredicted RBP23.08■■□□□ 1.29
RELA-201ENST00000308639 CACNA2D4Q7Z3S7 1137 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 FAM163AQ96GL9 167 aaPredicted RBP23.08■■□□□ 1.29
RELA-201ENST00000308639 TOM1O60784 492 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 STAT3P40763 770 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 ARID5AQ03989 594 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 TRIM58Q8NG06 486 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 JRKLQ9Y4A0 524 aa23.08■■□□□ 1.29
RELA-201ENST00000308639 TUBBP07437 444 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 SNHG28P0DPA3 235 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 SKIDA1Q1XH10 827 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 MYOCDQ8IZQ8 938 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 MSL3Q8N5Y2 521 aaKnown RBP23.07■■□□□ 1.28
RELA-201ENST00000308639 MS4A14Q96JA4 679 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 OSBPL9Q96SU4 736 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 RIC8AQ9NPQ8 531 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 PANK4Q9NVE7 773 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 POTEB3A0JP26 581 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 POTECB2RU33 542 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
RELA-201ENST00000308639 CCDC40Q4G0X9 1142 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 PDXDC1Q6P996 788 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 POTEBQ6S5H4 581 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 GOLGA5Q8TBA6 731 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 TSGA10Q9BZW7 698 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 FEZ2Q9UHY8 353 aaPredicted RBP23.07■■□□□ 1.28
RELA-201ENST00000308639 KIAA1024Q9UPX6 916 aa23.07■■□□□ 1.28
RELA-201ENST00000308639 IGKV6D-41A0A0C4DH26 115 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 PNMA6FA0A0J9YX94 578 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 TLR2O60603 784 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 SNAP25P60880 206 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 LRRC63Q05C16 580 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 PDIA5Q14554 519 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 HGSNATQ68CP4 663 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 RBM17Q96I25 401 aaKnown RBP23.06■■□□□ 1.28
RELA-201ENST00000308639 RAB34Q9BZG1 259 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 ZHX3Q9H4I2 956 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 TARSL2A2RTX5 802 aaKnown RBP23.06■■□□□ 1.28
RELA-201ENST00000308639 AGPSO00116 658 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 TTLL1O95922 423 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 NAP1L1P55209 391 aaKnown RBP23.06■■□□□ 1.28
RELA-201ENST00000308639 DOK7Q18PE1 504 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 ZFPM1Q8IX07 1006 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 SPATA4Q8NEY3 305 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 POLD4Q9HCU8 107 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 PCDHA12Q9UN75 941 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 NHSQ6T4R5 1651 aa23.06■■□□□ 1.28
RELA-201ENST00000308639 NOL4O94818 638 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 PRPF6O94906 941 aaKnown RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 SHMT1P34896 483 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 CACNB3P54284 484 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 USP40Q9NVE5 1235 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 PCDHAC2Q9Y5I4 1007 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 CLK2P49760 499 aaKnown RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 NFIAQ12857 509 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 FAM26FQ5R3K3 315 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 CCDC84Q86UT8 332 aaPredicted RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 SERPINB13Q9UIV8 391 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 USP21Q9UK80 565 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 TRIM66O15016 1216 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 POLR2FP61218 127 aaKnown RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 DDR1Q08345 913 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 KCTD19Q17RG1 926 aaPredicted RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 ASTE1Q2TB18 679 aaPredicted RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 MAP9Q49MG5 647 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 ZCWPW2Q504Y3 356 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 LEKR1Q6ZMV7 388 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 DNAAF5Q86Y56 855 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms