RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MSH4O15457 936 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 HERVK_113P62684 666 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 IRX3P78415 501 aaPredicted RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 SPIRE1Q08AE8 756 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 MKRN3Q13064 507 aaKnown RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 BAATQ14032 418 aaPredicted RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 POSTNQ15063 836 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 TMEM266Q2M3C6 531 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 TKFCQ3LXA3 575 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 ANO6Q4KMQ2 910 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 RNF207Q6ZRF8 634 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 C11orf57Q6ZUT1 292 aaPredicted RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 FASTKD5Q7L8L6 764 aaKnown RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 CABP7Q86V35 215 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 SAMD3Q8N6K7 520 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 C2orf69Q8N8R5 385 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 MS4A4AQ96JQ5 239 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 PLIN2Q99541 437 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 MTRQ99707 1265 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 SAGE1Q9NXZ1 904 aa7.85□□□□□ -1.15
PTCD2-201ENST00000308077 MAP3K20Q9NYL2 800 aaKnown RBP7.85□□□□□ -1.15
PTCD2-201ENST00000308077 BIN1O00499 593 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 TBX3O15119 743 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PLCG1P19174 1290 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 CASP1P29466 404 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 ZNF76P36508 570 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 TXLNAP40222 546 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 UBA7P41226 1012 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 AFMP43652 599 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 GRB10Q13322 594 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PDIA5Q14554 519 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 STX1AQ16623 288 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 L1TD1Q5T7N2 865 aaKnown RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 MB21D1Q8N884 522 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 IQUBQ8NA54 791 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 STAMQ92783 540 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PAGE5Q96GU1 130 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 DNAJC25Q9H1X3 360 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 ACAD9Q9H845 621 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 TXNRD2Q9NNW7 524 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 A1CFQ9NQ94 594 aaKnown RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 LRWD1Q9UFC0 647 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 USP25Q9UHP3 1055 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PCDHA5Q9Y5H7 936 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 ARP10275 920 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 ITGB5P18084 799 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 EIF2AK2P19525 551 aaKnown RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 STAT6P42226 847 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SARSP49591 514 aaKnown RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 MRPS9P82933 396 aaKnown RBP7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PGM5Q15124 567 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 ECM1Q16610 540 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 CEP55Q53EZ4 464 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SPRYD7Q5W111 196 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PLA2G4DQ86XP0 818 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 RIOX2Q8IUF8 465 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SLFN12Q8IYM2 578 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 CEP57L1Q8IYX8 460 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SPATA20Q8TB22 786 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 BRI3BPQ8WY22 251 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PNMA5Q96PV4 448 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 SPATC1LQ9H0A9 340 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PXMP2Q9NR77 195 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 CYP39A1Q9NYL5 469 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 RBPJLQ9UBG7 517 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 PCDHA12Q9UN75 941 aa7.84□□□□□ -1.15
PTCD2-201ENST00000308077 CCL15-CCL14A0A0B4J2E2 113 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 BTBD19C9JJ37 291 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 MEIS1O00470 390 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 MARCH6O60337 910 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CYP2C8P10632 490 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 BMP6P22004 513 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 OSBPP22059 807 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 GTF2A2P52657 109 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 DPYDQ12882 1025 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 ZRSR1Q15695 479 aaKnown RBP7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CCL15Q16663 113 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 Q3C1V9 767 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 DPCR1Q3MIW9 517 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 NT5DC1Q5TFE4 455 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 RRAGBQ5VZM2 374 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 PCNX4Q63HM2 1172 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 ISM2Q6H9L7 571 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 KANK3Q6NY19 840 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 SNX29Q8TEQ0 813 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 FAM20AQ96MK3 541 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 RMDN3Q96TC7 470 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 MXRA8Q9BRK3 442 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 PDCD2LQ9BRP1 358 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 PYM1Q9BRP8 204 aaKnown RBP7.83□□□□□ -1.16
PTCD2-201ENST00000308077 MOV10L1Q9BXT6 1211 aaKnown RBP7.83□□□□□ -1.16
PTCD2-201ENST00000308077 RAB34Q9BZG1 259 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CCDC39Q9UFE4 941 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms