RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 KAT6AQ92794 2004 aa12.54□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 RGS20O76081 388 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GGPS1O95749 300 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ASGR1P07306 291 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 UBA1P22314 1058 aaKnown RBP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ICAM3P32942 547 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 ACLYP53396 1101 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 NEDD9Q14511 834 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 UBE2Q1Q7Z7E8 422 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GIMAP8Q8ND71 665 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 COPS5Q92905 334 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 GLT1D1Q96MS3 346 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 STARD7Q9NQZ5 370 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.4
CSPG4P2Y-201ENST00000306853 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 A0A1W2PQY0 241 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MAFGO15525 162 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SORBS3O60504 671 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CABYRO75952 493 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MMP1P03956 469 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MYL3P08590 195 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PTGS1P23219 599 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 NKX3-2P78367 333 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 LAMC2Q13753 1193 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CEP55Q53EZ4 464 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 TMEM63BQ5T3F8 832 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 DPF3Q92784 378 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 TCEAL9Q9UHQ7 104 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 UBIAD1Q9Y5Z9 338 aa12.52□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 KPNA6O60684 536 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MMP3P08254 477 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CYP3A4P08684 503 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 COL6A1P12109 1028 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 ITGB5P18084 799 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 ARHGAP1Q07960 439 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 KRT40Q6A162 431 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 A6NJR5 290 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 M0R2N6 131 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CTAGE5O15320 804 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 EVI5O60447 810 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 GJB2P29033 226 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 USP11P51784 963 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 GUCY1B3Q02153 619 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SP4Q02446 784 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 NPY5RQ15761 445 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 DGKDQ16760 1214 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CYFIP1Q7L576 1253 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 NAP1L4Q99733 375 aaKnown RBP12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 KATNAL1Q9BW62 490 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 ELP1O95163 1332 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 H3BQV1 296 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 KCNA2P16389 499 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 CIITAP33076 1130 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 RTP1P59025 263 aa12.49□□□□□ -0.41
CSPG4P2Y-201ENST00000306853 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms