RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 UBA1P22314 1058 aaKnown RBP12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 BFSP2Q13515 415 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 RTN1Q16799 776 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 ADCK5Q3MIX3 580 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 C7orf31Q8N865 590 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 SCLYQ96I15 445 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 ALG1Q9BT22 464 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 WNT8AQ9H1J5 351 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 ZBBXA8MT70 800 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 RGS20O76081 388 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 REC8O95072 547 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 DNAJB2P25686 324 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 PSEN2P49810 448 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 MFSD10Q14728 455 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 PTGISQ16647 500 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 TSGA10IPQ3SY00 556 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 JAKMIP1Q96N16 626 aaKnown RBP12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 RTEL1Q9NZ71 1219 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 CNTNAP5Q8WYK1 1306 aa12.5□□□□□ -0.41
HMGN1P35-201ENST00000303758 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 FIBPO43427 364 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 F2P00734 622 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 PFKMP08237 780 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 ACTN1P12814 892 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 RFC2P35250 354 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 NAPAP54920 295 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 NEDD9Q14511 834 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 UBE2SQ16763 222 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 KIAA0753Q2KHM9 967 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 HSDL1Q3SXM5 330 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 BLOC1S2Q6QNY1 142 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 C16orf59Q7L2K0 433 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 DEFB128Q7Z7B8 93 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 KAT2BQ92831 832 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
HMGN1P35-201ENST00000303758 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 MEIS2O14770 477 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 SP2Q02086 613 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 SLC17A8Q8NDX2 589 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 TIFAQ96CG3 184 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 GTF2IRD1Q9UHL9 959 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
HMGN1P35-201ENST00000303758 GRXCR1A8MXD5 290 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 CPA1P15085 419 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 FOSL2P15408 326 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 PSMA5P28066 241 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 ICAM3P32942 547 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 HSPA4P34932 840 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 SP4Q02446 784 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 RAB30Q15771 203 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 RASIP1Q5U651 963 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 METTL7BQ6UX53 244 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 Q6ZUG5 572 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 CYFIP1Q7L576 1253 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 BRF1Q92994 677 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 CDHR1Q96JP9 859 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 CDX2Q99626 313 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
HMGN1P35-201ENST00000303758 SLC4A7Q9Y6M7 1214 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms