RNA–Protein interactions for RNA: ENST00000303622.13

MARK3-202, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MARK3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-202ENST00000303622 E7EVH7 732 aa17■□□□□ 0.31
MARK3-202ENST00000303622 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
MARK3-202ENST00000303622 FAM228BP0C875 321 aa17■□□□□ 0.31
MARK3-202ENST00000303622 GNA11P29992 359 aa17■□□□□ 0.31
MARK3-202ENST00000303622 SFMBT2Q5VUG0 894 aa17■□□□□ 0.31
MARK3-202ENST00000303622 ADAT2Q7Z6V5 191 aaKnown RBP17■□□□□ 0.31
MARK3-202ENST00000303622 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
MARK3-202ENST00000303622 BAP1Q92560 729 aa17■□□□□ 0.31
MARK3-202ENST00000303622 CEP95Q96GE4 821 aa17■□□□□ 0.31
MARK3-202ENST00000303622 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
MARK3-202ENST00000303622 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
MARK3-202ENST00000303622 CEP104O60308 925 aa17■□□□□ 0.31
MARK3-202ENST00000303622 SLURP2P0DP57 97 aa17■□□□□ 0.31
MARK3-202ENST00000303622 KCNMA1Q12791 1236 aa17■□□□□ 0.31
MARK3-202ENST00000303622 IFT88Q13099 833 aa17■□□□□ 0.31
MARK3-202ENST00000303622 KRT79Q5XKE5 535 aa17■□□□□ 0.31
MARK3-202ENST00000303622 PDXDC1Q6P996 788 aa17■□□□□ 0.31
MARK3-202ENST00000303622 EMBQ6PCB8 327 aa17■□□□□ 0.31
MARK3-202ENST00000303622 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
MARK3-202ENST00000303622 PNMA5Q96PV4 448 aa17■□□□□ 0.31
MARK3-202ENST00000303622 TSG101Q99816 390 aa17■□□□□ 0.31
MARK3-202ENST00000303622 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 TLR2O60603 784 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 SHOX2O60902 331 aaPredicted RBP16.99■□□□□ 0.31
MARK3-202ENST00000303622 RASA1P20936 1047 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 SLC16A2P36021 539 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 KLHL30Q0D2K2 578 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 ECM1Q16610 540 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 TCERG1LQ5VWI1 586 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 NAA35Q5VZE5 725 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 F8W031 263 aaPredicted RBP16.99■□□□□ 0.31
MARK3-202ENST00000303622 RAD51CO43502 376 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 MYL1P05976 194 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 TMEM266Q2M3C6 531 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 AK8Q96MA6 479 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
MARK3-202ENST00000303622 E9PMD0 336 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 NR1D1P20393 614 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
MARK3-202ENST00000303622 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
MARK3-202ENST00000303622 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
MARK3-202ENST00000303622 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
MARK3-202ENST00000303622 MMS22LQ6ZRQ5 1243 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 UNC13DQ70J99 1090 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 TAF4BQ92750 862 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.98■□□□□ 0.31
MARK3-202ENST00000303622 HNRNPH1P31943 449 aaKnown RBP16.98■□□□□ 0.31
MARK3-202ENST00000303622 LSP1P33241 339 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 MYOCDQ8IZQ8 938 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 PLAAQ9Y263 795 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 NUP98P52948 1817 aa16.98■□□□□ 0.31
MARK3-202ENST00000303622 MYH3P11055 1940 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 LOC102724159A0A0B4J2E5 919 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 CDK8P49336 464 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 HDLBPQ00341 1268 aaKnown RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 PAK2Q13177 524 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 PWP2Q15269 919 aaKnown RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 LAD1O00515 517 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 TMOD1P28289 359 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 PRPHP41219 470 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 NFIXQ14938 502 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 UBLCP1Q8WVY7 318 aaPredicted RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 SH3GL2Q99962 352 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 DDX47Q9H0S4 455 aaKnown RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 DCAF17Q5H9S7 520 aaPredicted RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
MARK3-202ENST00000303622 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 COL4A3BPQ9Y5P4 624 aa16.97■□□□□ 0.31
MARK3-202ENST00000303622 GOLGA6L10A6NI86 522 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 BAG3O95817 575 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
MARK3-202ENST00000303622 FAM26FQ5R3K3 315 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 KIAA1024Q9UPX6 916 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 SMIM23A6NLE4 172 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 BTDP43251 543 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
MARK3-202ENST00000303622 FIGNQ5HY92 759 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 ALS2CLQ60I27 953 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 ZNF662Q6ZS27 426 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 DPH5Q9H2P9 285 aa16.96■□□□□ 0.31
MARK3-202ENST00000303622 MEIS1O00470 390 aa16.95■□□□□ 0.3
MARK3-202ENST00000303622 FGFR1OPO95684 399 aaKnown RBP16.95■□□□□ 0.3
MARK3-202ENST00000303622 STAT3P40763 770 aa16.95■□□□□ 0.3
MARK3-202ENST00000303622 CDK17Q00537 523 aa16.95■□□□□ 0.3
MARK3-202ENST00000303622 COASYQ13057 564 aa16.95■□□□□ 0.3
MARK3-202ENST00000303622 GBP6Q6ZN66 633 aa16.95■□□□□ 0.3
MARK3-202ENST00000303622 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
MARK3-202ENST00000303622 RAD54LQ92698 747 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms