RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 LETM2Q2VYF4 491 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 DUSP28Q4G0W2 176 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 CDHR1Q96JP9 859 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 SENP7Q9BQF6 1050 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 UNC93B1Q9H1C4 597 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 GNEQ9Y223 722 aaKnown RBP22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 ZDHHC9Q9Y397 364 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 CENPFP49454 3210 aa22.77■■□□□ 1.24
SCAMP3-201ENST00000302631 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 TDP2O95551 362 aa22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 SMPD1P17405 629 aa22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 SETQ01105 290 aaPredicted RBP22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 ORC2Q13416 577 aaPredicted RBP22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.76■■□□□ 1.233e-8■■■■■ 46.9
SCAMP3-201ENST00000302631 KCNH7Q9NS40 1196 aa22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 Q9Y3F1 56 aa22.76■■□□□ 1.23
SCAMP3-201ENST00000302631 DOCK5Q9H7D0 1870 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 NKRFO15226 690 aaKnown RBP eCLIP22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 MSCO60682 206 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 ARP10275 920 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 CCL5P13501 91 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 NKX3-2P78367 333 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 SP2Q02086 613 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 TNFAIP2Q03169 654 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 MTMR1Q13613 665 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 RILPL1Q5EBL4 403 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 TMEM63BQ5T3F8 832 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 MYSM1Q5VVJ2 828 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 LHX8Q68G74 356 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 FERMT3Q86UX7 667 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 PLA2G4DQ86XP0 818 aa22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 IPO9Q96P70 1041 aaKnown RBP22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 DDX20Q9UHI6 824 aaKnown RBP22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 NOL7Q9UMY1 257 aaKnown RBP22.75■■□□□ 1.23
SCAMP3-201ENST00000302631 CCNT1O60563 726 aaKnown RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 DUSP11O75319 330 aaKnown RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 TXNP10599 105 aaKnown RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 MRVI1Q9Y6F6 885 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 POTEFA5A3E0 1075 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 SLC37A4O43826 429 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 ATP9AO75110 1047 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 F13A1P00488 732 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 KCNA2P16389 499 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 LY6KQ17RY6 165 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 PRR16Q569H4 304 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 AGO4Q9HCK5 861 aaKnown RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 KCNMB3Q9NPA1 279 aa22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 DAXXQ9UER7 740 aaPredicted RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 DDX25Q9UHL0 483 aaKnown RBP22.74■■□□□ 1.23
SCAMP3-201ENST00000302631 CNGA1P29973 690 aa22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 TTC38Q5R3I4 469 aa22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 ETNPPLQ8TBG4 499 aa22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 EMID1Q96A84 441 aaPredicted RBP22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-201ENST00000302631 NFASCO94856 1347 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 TBX3O15119 743 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 MSH4O15457 936 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 DHX15O43143 795 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 UBA1P22314 1058 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 ARHGAP1Q07960 439 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 NEDD9Q14511 834 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 GIMAP8Q8ND71 665 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 RNF208Q9H0X6 261 aa22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 CIZ1Q9ULV3 898 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-201ENST00000302631 GJB1P08034 283 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 RARBP10826 455 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 GJA9P57773 515 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 NUCB2P80303 420 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 ITGB3BPQ13352 177 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 C4orf32Q8N8J7 132 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 COPS5Q92905 334 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 SLC5A5Q92911 643 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 CRISPLD2Q9H0B8 497 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 PCDHB6Q9Y5E3 794 aa22.71■■□□□ 1.23
SCAMP3-201ENST00000302631 IPO5O00410 1097 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 CTAGE5O15320 804 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 ADAMTS4O75173 837 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 GH1P01241 217 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 CAPN2P17655 700 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 GJC2Q5T442 439 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 HAS1Q92839 578 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 FAM20AQ96MK3 541 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 MTMR9Q96QG7 549 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 BCAS3Q9H6U6 928 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 OGDHLQ9ULD0 1010 aa22.7■■□□□ 1.22
SCAMP3-201ENST00000302631 FARP2O94887 1054 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 ATP2B1P20020 1258 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 LAMC2Q13753 1193 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 NBR1Q14596 966 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 ZNF174Q15697 407 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 METTL7BQ6UX53 244 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 LENG1Q96BZ8 264 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 RIT2Q99578 217 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 ZNF577Q9BSK1 485 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 TBC1D22BQ9NU19 505 aa22.69■■□□□ 1.22
SCAMP3-201ENST00000302631 NEMFO60524 1076 aa22.68■■□□□ 1.22
SCAMP3-201ENST00000302631 PSMD10O75832 226 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms