RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 NT5DC1Q5TFE4 455 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 LRCH2Q5VUJ6 765 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 LRRC15Q8TF66 581 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 BRI3BPQ8WY22 251 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 PNMA5Q96PV4 448 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 NUDT12Q9BQG2 462 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 ZNF577Q9BSK1 485 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
CCDC7-202ENST00000302316 TXNRD2Q9NNW7 524 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MAN1B1Q9UKM7 699 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 VAV3Q9UKW4 847 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 PFASO15067 1338 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 PDHXO00330 501 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 GAS7O60861 476 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SLC25A27O95847 323 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 ARP10275 920 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 CYP2C8P10632 490 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 CCND2P30279 289 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 DPYDQ12882 1025 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 HAUS3Q68CZ6 603 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 NIPA1Q7RTP0 329 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 ERMNQ8TAM6 284 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 NSUN6Q8TEA1 469 aaKnown RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SMCR8Q8TEV9 937 aaPredicted RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 MTRQ99707 1265 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 GPBP1L1Q9HC44 474 aaPredicted RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 RBPJLQ9UBG7 517 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 STK17AQ9UEE5 414 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 UBIAD1Q9Y5Z9 338 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 BTBD19C9JJ37 291 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 BCRP11274 1271 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 COPB2P35606 906 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SARSP49591 514 aaKnown RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 CUL4BQ13620 913 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 TMEM119Q4V9L6 283 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 LUZP1Q86V48 1076 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SPATA20Q8TB22 786 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
CCDC7-202ENST00000302316 WDR11Q9BZH6 1224 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 JADE2Q9NQC1 790 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 SLC45A1Q9Y2W3 748 aa14.59□□□□□ -0.07
CCDC7-202ENST00000302316 IPO5O00410 1097 aaKnown RBP14.58□□□□□ -0.08
CCDC7-202ENST00000302316 PSMD10O75832 226 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 ERCC3P19447 782 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 MTMR1Q13613 665 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 XRRA1Q6P2D8 792 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 ANKRD23Q86SG2 305 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 TRIML1Q8N9V2 468 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 ANP32BQ92688 251 aaKnown RBP14.58□□□□□ -0.08
CCDC7-202ENST00000302316 NT5C3AQ9H0P0 336 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 KBTBD4Q9NVX7 518 aa14.58□□□□□ -0.08
CCDC7-202ENST00000302316 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 TESPA1A2RU30 521 aaPredicted RBP14.57□□□□□ -0.08
CCDC7-202ENST00000302316 SLC26A4O43511 780 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 CHMP2AO43633 222 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 NR3C2P08235 984 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 LARP4BQ92615 738 aaKnown RBP14.57□□□□□ -0.08
CCDC7-202ENST00000302316 GSDMAQ96QA5 445 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 TEKT3Q9BXF9 490 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 PKD2L1Q9P0L9 805 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 STK24Q9Y6E0 443 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 MYL1P05976 194 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 ERVK-24P63145 666 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 PPP2R5CQ13362 524 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 MORC3Q14149 939 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 ECM1Q16610 540 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 Q3C1V9 767 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 HYIQ5T013 277 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 VSIG10LQ86VR7 867 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 RAD54LQ92698 747 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 BLOC1S4Q9NUP1 217 aa14.57□□□□□ -0.08
CCDC7-202ENST00000302316 LCTP09848 1927 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 MED24O75448 989 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 ZNF157P51786 506 aaPredicted RBP14.56□□□□□ -0.08
CCDC7-202ENST00000302316 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
CCDC7-202ENST00000302316 SV2BQ7L1I2 683 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 RASAL3Q86YV0 1011 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 FAM43AQ8N2R8 423 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 RIT2Q99578 217 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 AGO4Q9HCK5 861 aaKnown RBP14.56□□□□□ -0.08
CCDC7-202ENST00000302316 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 BECN2A8MW95 431 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 DDX39AO00148 427 aaKnown RBP14.56□□□□□ -0.08
CCDC7-202ENST00000302316 EML1O00423 815 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 BMP6P22004 513 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 AMPD3Q01432 767 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 IQCB1Q15051 598 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 WDR78Q5VTH9 848 aa14.56□□□□□ -0.08
CCDC7-202ENST00000302316 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms