RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 PIGOQ8TEQ8 1089 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 FAM13AO94988 1023 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 KRT71Q3SY84 523 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 CPXCR1Q8N123 301 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 MYCT1Q8N699 235 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 MTRQ99707 1265 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 NTSR2O95665 410 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 IFNAR2P48551 515 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 USP14P54578 494 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 IFT88Q13099 833 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 VWA3BQ502W6 1294 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 VEZTQ9HBM0 779 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
ATP1A3-201ENST00000302102 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 DBNDD1Q9H9R9 158 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 MYMKA6NI61 221 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 KRIT1O00522 736 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 MYBL2P10244 700 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 KCNJ6P48051 423 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 GUCY1A3Q02108 690 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 NNTQ13423 1086 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 NEFHP12036 1026 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 HERVK_113P62684 666 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 CDKAL1Q5VV42 579 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 TAB3Q8N5C8 712 aaPredicted RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 DDX47Q9H0S4 455 aaKnown RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 MED4Q9NPJ6 270 aa12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
ATP1A3-201ENST00000302102 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 USP17L10C9JJH3 530 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 GFPT2O94808 682 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 COPB2P35606 906 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 CUL5Q93034 780 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 OSBPL9Q96SU4 736 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 JRKLQ9Y4A0 524 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 PDE2AO00408 941 aaPredicted RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 TNNC1P63316 161 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 NUDT12Q9BQG2 462 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 RBM12Q9NTZ6 932 aaKnown RBP12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 EPHB6O15197 1021 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 MAN2A1Q16706 1144 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
ATP1A3-201ENST00000302102 ABCC6O95255 1503 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 CARSP49589 748 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 SEC24CP53992 1094 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 ZNF211Q13398 564 aaPredicted RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 C12orf60Q5U649 245 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 ARL6IP4Q66PJ3 421 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 SHISA4Q96DD7 197 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 THAP9Q9H5L6 903 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 ATP8A1Q9Y2Q0 1164 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 CYTH3O43739 400 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 SLC37A4O43826 429 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 FKBP3Q00688 224 aaKnown RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 MAP2K1Q02750 393 aaPredicted RBP12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 FBXW10Q5XX13 1052 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
ATP1A3-201ENST00000302102 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms