RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 RPSAP08865 295 aaKnown RBP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 SLC5A1P13866 664 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CCDC50Q8IVM0 306 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 ISCUQ9H1K1 167 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 TLR2O60603 784 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 PAEPP09466 180 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CALM1P0DP23 149 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CALM2P0DP24 149 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CALM3P0DP25 149 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CYP7A1P22680 504 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CTNNA1P35221 906 aaKnown RBP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 FLT3P36888 993 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 EHHADHQ08426 723 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 GIGYF2Q6Y7W6 1299 aaKnown RBP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 HVCN1Q96D96 273 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 BCCIPQ9P287 314 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
ZNF558-201ENST00000301475 RBAK-RBAKDNI3L0D1 243 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 PPP2R2AP63151 447 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 MEI1Q5TIA1 1274 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 SLC39A2Q9NP94 309 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 LRP2BPQ9P2M1 347 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 PCDHGC5Q9Y5F6 944 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 GOLGB1Q14789 3259 aaKnown RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 SSU72P8A0A1W2PR75 194 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 F8W031 263 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 INF2Q27J81 1249 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 CENPPQ6IPU0 288 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 TBC1D22AQ8WUA7 517 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 PACSIN1Q9BY11 444 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 TRIM6Q9C030 488 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 NLRC4Q9NPP4 1024 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 RREB1Q92766 1687 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 PPP1R12AO14974 1030 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 DNAJC8O75937 253 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 ATP6V1G2O95670 118 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 DRD4P21917 467 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 SLC8A1P32418 973 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 SEMA3FQ13275 785 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 TXNRD1Q16881 649 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 DNAJC10Q8IXB1 793 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 TBC1D31Q96DN5 1066 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 GOLPH3Q9H4A6 298 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 FBXL5Q9UKA1 691 aa11.97□□□□□ -0.49
ZNF558-201ENST00000301475 NOVA2Q9UNW9 492 aaKnown RBP11.97□□□□□ -0.49
ZNF558-201ENST00000301475 NHSL1Q5SYE7 1610 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 EP400Q96L91 3159 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 COL5A2P05997 1499 aaPredicted RBP11.96□□□□□ -0.49
ZNF558-201ENST00000301475 MROH5Q6ZUA9 1318 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 A0A1B0GUA9 196 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 M0R2N6 131 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 TNNC1P63316 161 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 BIRC3Q13489 604 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 NAA25Q14CX7 972 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 NAB2Q15742 525 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 CABP7Q86V35 215 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 TRMT112Q9UI30 125 aaKnown RBP11.96□□□□□ -0.49
ZNF558-201ENST00000301475 PCDH11XQ9BZA7 1347 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 PCDH11YQ9BZA8 1340 aa11.96□□□□□ -0.49
ZNF558-201ENST00000301475 MAGOHP61326 146 aaKnown RBP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 DYNLL1P63167 89 aaKnown RBP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 KCNMA1Q12791 1236 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 ODF2Q5BJF6 829 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 CACNA2D4Q7Z3S7 1137 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 MAGOHBQ96A72 148 aaKnown RBP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 STAMBPL1Q96FJ0 436 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 RIOK1Q9BRS2 568 aaKnown RBP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.96□□□□□ -0.5
ZNF558-201ENST00000301475 PCDHA4Q9UN74 947 aa11.96□□□□□ -0.5
ZNF558-201ENST00000301475 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 HIBCHQ6NVY1 386 aaPredicted RBP11.95□□□□□ -0.5
ZNF558-201ENST00000301475 CCDC84Q86UT8 332 aaPredicted RBP11.95□□□□□ -0.5
ZNF558-201ENST00000301475 MDM1Q8TC05 714 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
ZNF558-201ENST00000301475 PPIP5K2O43314 1243 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 ORC4O43929 436 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 CALML3P27482 149 aa11.95□□□□□ -0.5
ZNF558-201ENST00000301475 GBP2P32456 591 aaPredicted RBP11.95□□□□□ -0.5
ZNF558-201ENST00000301475 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms