RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 RIN2Q8WYP3 895 aaPredicted RBP17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 PANX2Q96RD6 677 aa17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 DUSP9Q99956 384 aaKnown RBP17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 PANK4Q9NVE7 773 aa17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 SAMM50Q9Y512 469 aa17.31■□□□□ 0.36
CHAF1A-201ENST00000301280 SPDYE3A6NKU9 549 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 PRPF6O94906 941 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 NOP2P46087 812 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 PSMC6P62333 389 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 KIF5AQ12840 1032 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 TAF3Q5VWG9 929 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 TBC1D22AQ8WUA7 517 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 MMTAG2Q9BU76 263 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 MYO6Q9UM54 1294 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 KLRC4O43908 158 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 NOVP48745 357 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 ATAD5Q96QE3 1844 aa17.3■□□□□ 0.36
CHAF1A-201ENST00000301280 VGLL3A8MV65 326 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 CCNE1P24864 410 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 SF3A3Q12874 501 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■■■■■ 32.9
CHAF1A-201ENST00000301280 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 TTC19Q6DKK2 380 aaPredicted RBP17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 CDC23Q9UJX2 597 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 LGALS16A8MUM7 142 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 ACTN1P12814 892 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 VSNL1P62760 191 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 PPP4CP60510 307 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 DGKZQ13574 1117 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 PROM2Q8N271 834 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 MMS19Q96T76 1030 aa17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
CHAF1A-201ENST00000301280 USP8P40818 1118 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 LRRC53A6NM62 1247 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 F5H6K3 240 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 CYLC1P35663 651 aaPredicted RBP17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 DNM2P50570 870 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 KLRC3Q07444 240 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 ZNF543Q08ER8 600 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 ADAT2Q7Z6V5 191 aaKnown RBP17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 TSG101Q99816 390 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 FZD1Q9UP38 647 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
CHAF1A-201ENST00000301280 TULP2O00295 520 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 FTCDO95954 541 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 SHMT1P34896 483 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 HSP90B2PQ58FF3 399 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 GIMAP8Q8ND71 665 aaPredicted RBP17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 PNMA5Q96PV4 448 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 LSM14BQ9BX40 385 aaKnown RBP17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 KRT86O43790 486 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 HYOU1Q9Y4L1 999 aa17.27■□□□□ 0.36
CHAF1A-201ENST00000301280 BICDL2A1A5D9 508 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 MAGEA1P43355 309 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 IFT81Q8WYA0 676 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.35
CHAF1A-201ENST00000301280 H0YIN7 160 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 RBAK-RBAKDNI3L0D1 243 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ECE2O60344 883 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 FAM133AQ8N9E0 248 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 SPAG5Q96R06 1193 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ADAMTS1Q9UHI8 967 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 REXO2Q9Y3B8 237 aaKnown RBP17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ESYT3A0FGR9 886 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 GCNT3O95395 438 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 NFRKBQ6P4R8 1299 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 MYOCDQ8IZQ8 938 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 NAA15Q9BXJ9 866 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms