RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 USP17L15C9J2P7 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L13C9JLJ4 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L11C9JVI0 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L18D6R9N7 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L22D6RA61 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L17D6RBQ6 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L19D6RCP7 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L20D6RJB6 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
BCCIP-202ENST00000299130 AKR1B10O60218 316 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 RAD51AP2Q09MP3 1159 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L24Q0WX57 530 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
BCCIP-202ENST00000299130 PDXDC1Q6P996 788 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L6PQ6QN14 398 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 NELFCDQ8IXH7 590 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 RAB34Q9BZG1 259 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 TSGA10Q9BZW7 698 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 TARSL2A2RTX5 802 aaKnown RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 USO1O60763 962 aaKnown RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 NOL4O94818 638 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 HOXA10P31260 410 aaPredicted RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 DOK7Q18PE1 504 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 HGSNATQ68CP4 663 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 CCNI2Q6ZMN8 369 aaPredicted RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 MYOCDQ8IZQ8 938 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 FAM71BQ8TC56 605 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 JRKLQ9Y4A0 524 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 ARFGEF1Q9Y6D6 1849 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 TRAF5O00463 557 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 TLR2O60603 784 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 TACC1O75410 805 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 STAT3P40763 770 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 SLC1A4P43007 532 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 RASSF7Q02833 373 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 NFIAQ12857 509 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 PSMD2Q13200 908 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 CCDC84Q86UT8 332 aaPredicted RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 TRIM58Q8NG06 486 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 CUL5Q93034 780 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 RPGRIP1Q96KN7 1286 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 LRRC1Q9BTT6 524 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 PSTPIP2Q9H939 334 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 PCDHA12Q9UN75 941 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 KIAA1024Q9UPX6 916 aa15.09■□□□□ 0.01
BCCIP-202ENST00000299130 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
BCCIP-202ENST00000299130 MYH10P35580 1976 aa15.08■□□□□ 0.01
BCCIP-202ENST00000299130 ABCB11O95342 1321 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 ZBTB5O15062 677 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 BUB1O43683 1085 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 RAD21O60216 631 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 MARCH6O60337 910 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 TOM1O60784 492 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 FGFR1OPO95684 399 aaKnown RBP15.08■□□□□ 0
BCCIP-202ENST00000299130 MAGEA1P43355 309 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 MTMR8Q96EF0 704 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 OSBPL9Q96SU4 736 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 DMGDHQ9UI17 866 aaKnown RBP15.08■□□□□ 0
BCCIP-202ENST00000299130 PCDHA2Q9Y5H9 948 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 PCDHAC2Q9Y5I4 1007 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 UBR3Q6ZT12 1888 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 POTEB3A0JP26 581 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 POTECB2RU33 542 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 POLRMTO00411 1230 aaKnown RBP15.08■□□□□ 0
BCCIP-202ENST00000299130 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
BCCIP-202ENST00000299130 ADRA2BP18089 450 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 MATR3P43243 847 aaKnown RBP eCLIP15.08■□□□□ 0
BCCIP-202ENST00000299130 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 MUM1L1Q5H9M0 696 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 POTEBQ6S5H4 581 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 CACNA2D4Q7Z3S7 1137 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 IQCDQ96DY2 449 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 TSG101Q99816 390 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
BCCIP-202ENST00000299130 RNF40O75150 1001 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 PRPF6O94906 941 aaKnown RBP15.07■□□□□ 0
BCCIP-202ENST00000299130 CAPN2P17655 700 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
BCCIP-202ENST00000299130 CACNB3P54284 484 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 SLC7A5Q01650 507 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 FOXR1Q6PIV2 292 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 CRAMP1Q96RY5 1269 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
BCCIP-202ENST00000299130 DNAJC18Q9H819 358 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 FAM204AQ9H8W3 233 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 VIPAS39Q9H9C1 493 aa15.07■□□□□ 0
BCCIP-202ENST00000299130 AGPSO00116 658 aa15.06■□□□□ 0
BCCIP-202ENST00000299130 ACTN2P35609 894 aa15.06■□□□□ 0
BCCIP-202ENST00000299130 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
BCCIP-202ENST00000299130 SNAP25P60880 206 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms