RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 RPAP3Q9H6T3 665 aaPredicted RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 ADAMTS5Q9UNA0 930 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 PPP2R2CQ9Y2T4 447 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 CEP83Q9Y592 693 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 A0A0G2JMZ2 1700 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 PPP1R12BO60237 982 aaPredicted RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 TUBBP07437 444 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 GNA11P29992 359 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 GJA5P36382 358 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 FANCCQ00597 558 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 ZRSR1Q15695 479 aaKnown RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 SH3D19Q5HYK7 790 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 TREML2Q5T2D2 321 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 LDLRAD1Q5T700 205 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 PPP1R18Q6NYC8 613 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 DRC1Q96MC2 740 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 AGBL1Q96MI9 1066 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 AMNQ9BXJ7 453 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 PSTPIP2Q9H939 334 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 C6orf50Q9HD87 102 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 DONSONQ9NYP3 566 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 VPS18Q9P253 973 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 RBBP6Q7Z6E9 1792 aaKnown RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 LCTP09848 1927 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 DNAH12Q6ZR08 3092 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 A0A1B0GVL5 298 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 PPFIA4O75335 1185 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 PTPREP23469 700 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 ADCY7P51828 1080 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 NDUFA8P51970 172 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 IKQ13123 557 aaPredicted RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 PTGDRQ13258 359 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 STK38Q15208 465 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 SPECC1Q5M775 1068 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 CCDC174Q6PII3 467 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 LRRC31Q6UY01 552 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 USP49Q70CQ1 688 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 VSTM4Q8IW00 320 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 REXO1Q8N1G1 1221 aaKnown RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 PRPF38AQ8NAV1 312 aaKnown RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 REPS2Q8NFH8 660 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 TBCKQ8TEA7 893 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 CCDC12Q8WUD4 166 aaPredicted RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 CHURC1Q8WUH1 139 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 ELP3Q9H9T3 547 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 SLC38A10Q9HBR0 1119 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 PDE11AQ9HCR9 933 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 L1RE1Q9UN81 338 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 C19orf81C9J6K1 198 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 ERLIN1O75477 346 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 TRAPPC10P48553 1259 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 USP14P54578 494 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 ATP2C1P98194 919 aaPredicted RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 DPCR1Q3MIW9 517 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 CST9Q5W186 159 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 TADA2BQ86TJ2 420 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 SLF1Q9BQI6 1058 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 TMEM60Q9H2L4 133 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 AS3MTQ9HBK9 375 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 MED4Q9NPJ6 270 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 HPSEQ9Y251 543 aa7.43□□□□□ -1.22
TMC1-201ENST00000297784 SRPRBQ9Y5M8 271 aaKnown RBP7.43□□□□□ -1.22
TMC1-201ENST00000297784 FAM237AA0A1B0GTK4 181 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 VWA5AO00534 786 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 PEX10O60683 326 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 ITGBL1O95965 494 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 MCM7P33993 719 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 CATSPERGQ6ZRH7 1159 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 SRGAP1Q7Z6B7 1085 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 FAM160B2Q86V87 743 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CLEC4DQ8WXI8 215 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CUL5Q93034 780 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 GBP3Q9H0R5 595 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 HSD3B7Q9H2F3 369 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CLEC11AQ9Y240 323 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 RIPK3Q9Y572 518 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 TRPM7Q96QT4 1865 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 FLOT1O75955 427 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 ICAM1P05362 532 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CMA1P23946 247 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 HOXA13P31271 388 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 PPATQ06203 517 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 RESP18Q5W5W9 173 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 LDHDQ86WU2 507 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CEP112Q8N8E3 955 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 ZNF526Q8TF50 670 aaPredicted RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 WDR24Q96S15 920 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
TMC1-201ENST00000297784 TANGO6Q9C0B7 1094 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CSRNP2Q9H175 543 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 CXorf56Q9H5V9 222 aa7.42□□□□□ -1.22
TMC1-201ENST00000297784 ANKZF1Q9H8Y5 726 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms