RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 GRID2IPA4D2P6 1211 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 DAPK3O43293 454 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 PPP2R5CQ13362 524 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RAB44Q7Z6P3 723 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ITSN1Q15811 1721 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KANSL1LA0AUZ9 987 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GGPS1O95749 300 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 DNA2P51530 1060 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CSTF3Q12996 717 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 WTAPQ15007 396 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CEP78Q5JTW2 689 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 DZIP3Q86Y13 1208 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CSGALNACT2Q8N6G5 542 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ACRBPQ8NEB7 543 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ENKURQ8TC29 256 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 BPIFA3Q9BQP9 254 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ASPSCR1Q9BZE9 553 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 PIGUQ9H490 435 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 EHD2Q9NZN4 543 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 HNRNPCL2B2RXH8 293 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KLHL41O60662 606 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 SRGAP2BP0DMP2 458 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CORO7P57737 925 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ASIC1P78348 528 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GALNT17Q6IS24 598 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 FERMT3Q86UX7 667 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 C6orf203Q9P0P8 240 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 LRP2BPQ9P2M1 347 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ATPIF1Q9UII2 106 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GGA2Q9UJY4 613 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 IFIT3O14879 490 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ANGPT2O15123 496 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 LZTS3O60299 673 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 PLCG2P16885 1265 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RTN1Q16799 776 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CAVIN4Q5BKX8 364 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 TMEM67Q5HYA8 995 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 BEST2Q8NFU1 509 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 SEPT1Q8WYJ6 367 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 TRAPPC9Q96Q05 1148 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RPAP3Q9H6T3 665 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 FBXO2Q9UK22 296 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 LRCH1Q9Y2L9 728 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KCNA2P16389 499 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 POLR2BP30876 1174 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GJA8P48165 433 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 TRIM71Q2Q1W2 868 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GRAMD1BQ3KR37 738 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RIBC1Q8N443 379 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RPS6KC1Q96S38 1066 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 MED12LQ86YW9 2145 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 MED13LQ71F56 2210 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 SLX4Q8IY92 1834 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 GSTO1P78417 241 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ROR2Q01974 943 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KHDRBS2Q5VWX1 349 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 JADE1Q6IE81 842 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 NEK10Q6ZWH5 1172 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 SKA1Q96BD8 255 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 NUDCD1Q96RS6 583 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 NOC4LQ9BVI4 516 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 DCLRE1BQ9H816 532 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 BTBD7Q9P203 1132 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CDC42BPAQ5VT25 1732 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ARHGAP5Q13017 1502 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 PKDREJQ9NTG1 2253 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 AP3B1O00203 1094 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ACADVLP49748 655 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 BFSP2Q13515 415 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ADALQ6DHV7 355 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 UBE3BQ7Z3V4 1068 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 HNRNPLLQ8WVV9 542 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF212Q9UDV6 495 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CCPG1Q9ULG6 757 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CNPY2Q9Y2B0 182 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 MYO5AQ9Y4I1 1855 aaKnown RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 MYO16Q9Y6X6 1858 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KRT37O76014 449 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF202O95125 648 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CHEK2O96017 543 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RGS2P41220 211 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 STAT1P42224 750 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RAB25P57735 213 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 ASIC2Q16515 512 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 KRT79Q5XKE5 535 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 RSAD2Q8WXG1 361 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 TRIM45Q9H8W5 580 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 MKNK2Q9HBH9 465 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 TRPC5Q9UL62 973 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-201ENST00000297405 CAMSAP1Q5T5Y3 1602 aa5.22□□□□□ -1.57
CSMD3-201ENST00000297405 BIVM-ERCC5R4GMW8 1640 aa5.21□□□□□ -1.57
CSMD3-201ENST00000297405 SERPINH1P50454 418 aaKnown RBP5.21□□□□□ -1.57
CSMD3-201ENST00000297405 RRS1Q15050 365 aaKnown RBP5.21□□□□□ -1.57
CSMD3-201ENST00000297405 DGCR14Q96DF8 476 aaKnown RBP5.21□□□□□ -1.57
CSMD3-201ENST00000297405 TUFT1Q9NNX1 390 aa5.21□□□□□ -1.57
CSMD3-201ENST00000297405 HMG20AQ9NP66 347 aa5.21□□□□□ -1.57
CSMD3-201ENST00000297405 RTEL1Q9NZ71 1219 aa5.21□□□□□ -1.57
CSMD3-201ENST00000297405 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.21□□□□□ -1.57
CSMD3-201ENST00000297405 SMG5Q9UPR3 1016 aaKnown RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms