RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PMS1P54277 932 aaKnown RBP23.9■■□□□ 1.42
SOX17-201ENST00000297316 MAP3K9P80192 1104 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 C12orf42Q96LP6 360 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 C7orf25Q9BPX7 421 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 TBX2Q13207 712 aaPredicted RBP23.89■■□□□ 1.42
SOX17-201ENST00000297316 C16orf45Q96MC5 204 aaPredicted RBP23.89■■□□□ 1.42
SOX17-201ENST00000297316 C19orf81C9J6K1 198 aa23.89■■□□□ 1.41
SOX17-201ENST00000297316 CCT6AP40227 531 aaKnown RBP23.89■■□□□ 1.41
SOX17-201ENST00000297316 TMEM119Q4V9L6 283 aa23.89■■□□□ 1.41
SOX17-201ENST00000297316 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
SOX17-201ENST00000297316 SLFN12Q8IYM2 578 aa23.89■■□□□ 1.41
SOX17-201ENST00000297316 CTDP1Q9Y5B0 961 aaPredicted RBP23.89■■□□□ 1.41
SOX17-201ENST00000297316 ZBED4O75132 1171 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 GIMAP8Q8ND71 665 aaPredicted RBP23.88■■□□□ 1.41
SOX17-201ENST00000297316 IL31RAQ8NI17 732 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 LARP4BQ92615 738 aaKnown RBP23.88■■□□□ 1.41
SOX17-201ENST00000297316 CLMNQ96JQ2 1002 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 PURBQ96QR8 312 aaKnown RBP23.88■■□□□ 1.41
SOX17-201ENST00000297316 ADD3Q9UEY8 706 aaKnown RBP23.88■■□□□ 1.41
SOX17-201ENST00000297316 POTEB3A0JP26 581 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 POTECB2RU33 542 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 ASIC1P78348 528 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 NCAPH2Q6IBW4 605 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 POTEBQ6S5H4 581 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 CDCA5Q96FF9 252 aa23.88■■□□□ 1.41
SOX17-201ENST00000297316 GLTPD2A6NH11 291 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 MYMKA6NI61 221 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 PPP1R12BO60237 982 aaPredicted RBP23.87■■□□□ 1.41
SOX17-201ENST00000297316 MED24O75448 989 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 USP50Q70EL3 339 aaPredicted RBP23.87■■□□□ 1.41
SOX17-201ENST00000297316 REPS2Q8NFH8 660 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 RAD54LQ92698 747 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 HPS3Q969F9 1004 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 TRERF1Q96PN7 1200 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 TRMT1Q9NXH9 659 aaKnown RBP23.87■■□□□ 1.41
SOX17-201ENST00000297316 RBBP6Q7Z6E9 1792 aaKnown RBP23.87■■□□□ 1.41
SOX17-201ENST00000297316 FCER1AP12319 257 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 TPD52L1Q16890 204 aaPredicted RBP23.87■■□□□ 1.41
SOX17-201ENST00000297316 SV2BQ7L1I2 683 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 ELP3Q9H9T3 547 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 TMOD4Q9NZQ9 345 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 KIAA1024Q9UPX6 916 aa23.87■■□□□ 1.41
SOX17-201ENST00000297316 E9PMD0 336 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 TBX3O15119 743 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 DSG3P32926 999 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 STK4Q13043 487 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 SPECC1LQ69YQ0 1117 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 CATSPERGQ6ZRH7 1159 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 DYMQ7RTS9 669 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 STK17AQ9UEE5 414 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 VAV3Q9UKW4 847 aa23.86■■□□□ 1.41
SOX17-201ENST00000297316 PEX10O60683 326 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 RPS6P62753 249 aaKnown RBP23.85■■□□□ 1.41
SOX17-201ENST00000297316 PDE4DQ08499 809 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 KRT31Q15323 416 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 TREML2Q5T2D2 321 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 E4F1Q66K89 784 aaPredicted RBP23.85■■□□□ 1.41
SOX17-201ENST00000297316 SYTL5Q8TDW5 730 aaPredicted RBP23.85■■□□□ 1.41
SOX17-201ENST00000297316 ARP10275 920 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 COG2Q14746 738 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 IRF2BP1Q8IU81 584 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 CCAR2Q8N163 923 aaKnown RBP23.85■■□□□ 1.41
SOX17-201ENST00000297316 FAM20AQ96MK3 541 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 TMX1Q9H3N1 280 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 CSADQ9Y600 493 aa23.85■■□□□ 1.41
SOX17-201ENST00000297316 POTEFA5A3E0 1075 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 POTEIP0CG38 1075 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 PBX1P40424 430 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 TMEM132BQ14DG7 1078 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 CEP55Q53EZ4 464 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 SNRNP48Q6IEG0 339 aaKnown RBP23.84■■□□□ 1.41
SOX17-201ENST00000297316 POTEGQ6S5H5 508 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 POTEEQ6S8J3 1075 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 NSMFQ6X4W1 530 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 TAAR1Q96RJ0 339 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 TAF1DQ9H5J8 278 aaPredicted RBP23.84■■□□□ 1.41
SOX17-201ENST00000297316 EML1O00423 815 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 DYNC1I1O14576 645 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 POTEJP0CG39 1038 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 CATSPER3Q86XQ3 398 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 TMEM139Q8IV31 216 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 EXOC1Q9NV70 894 aa23.84■■□□□ 1.41
SOX17-201ENST00000297316 LIMA1Q9UHB6 759 aaKnown RBP23.84■■□□□ 1.41
SOX17-201ENST00000297316 ZNF214Q9UL59 606 aaPredicted RBP23.84■■□□□ 1.41
SOX17-201ENST00000297316 MEIS1O00470 390 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 TTLL12Q14166 644 aaPredicted RBP23.83■■□□□ 1.41
SOX17-201ENST00000297316 HYIQ5T013 277 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 MCF2L2Q86YR7 1114 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 TEX2Q8IWB9 1127 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 TC2NQ8N9U0 490 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 KIAA0895Q8NCT3 520 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 OTUD5Q96G74 571 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 RNF146Q9NTX7 359 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 ADAMTS5Q9UNA0 930 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 RPTORQ8N122 1335 aa23.83■■□□□ 1.41
SOX17-201ENST00000297316 SSBP05455 408 aaKnown RBP eCLIP23.83■■□□□ 1.4
SOX17-201ENST00000297316 ITGB5P18084 799 aa23.83■■□□□ 1.4
SOX17-201ENST00000297316 ADKP55263 362 aaKnown RBP23.83■■□□□ 1.4
SOX17-201ENST00000297316 AMPD3Q01432 767 aa23.83■■□□□ 1.4
SOX17-201ENST00000297316 EHMT1Q9H9B1 1298 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms