RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 EDIL3O43854 480 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 FGFR1OPO95684 399 aaKnown RBP10.34□□□□□ -0.75
CLRN1-201ENST00000295911 DPEP1P16444 411 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 KCNA3P22001 575 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 CCNE1P24864 410 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
CLRN1-201ENST00000295911 TGFB2P61812 414 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
CLRN1-201ENST00000295911 HYIQ5T013 277 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 TMEM139Q8IV31 216 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 SNX29Q8TEQ0 813 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 LARP4BQ92615 738 aaKnown RBP10.34□□□□□ -0.75
CLRN1-201ENST00000295911 RAD54LQ92698 747 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 P2RX5Q93086 422 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 MBOAT7Q96N66 472 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 ANO3Q9BYT9 981 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 SH2D4AQ9H788 454 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 LOXHD1Q8IVV2 1947 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 TCP10L2B9ZVM9 353 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 RAD17O75943 681 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 ADKP55263 362 aaKnown RBP10.33□□□□□ -0.76
CLRN1-201ENST00000295911 TMEM119Q4V9L6 283 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 TTI2Q6NXR4 508 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 FOXR2Q6PJQ5 311 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 CHURC1Q8WUH1 139 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 HAS1Q92839 578 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 TRIM47Q96LD4 638 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PNMA5Q96PV4 448 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 BLOC1S4Q9NUP1 217 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PIM2Q9P1W9 311 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 MAPK8IP1Q9UQF2 711 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 TMX2Q9Y320 296 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 A0A1W2PQC6 194 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 MYMKA6NI61 221 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PIK3CDO00329 1044 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 MEIS2O14770 477 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 MAP3K7O43318 606 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PLA2G6O60733 806 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 CCT6AP40227 531 aaKnown RBP10.33□□□□□ -0.76
CLRN1-201ENST00000295911 DNM2P50570 870 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 STAT2P52630 851 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 ETF1P62495 437 aaKnown RBP10.33□□□□□ -0.76
CLRN1-201ENST00000295911 RBL2Q08999 1139 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 MCM6Q14566 821 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 Q4G0T1 1027 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 USP17L6PQ6QN14 398 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 CSGALNACT2Q8N6G5 542 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 ERMNQ8TAM6 284 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 LRRC15Q8TF66 581 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 IQCDQ96DY2 449 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 FAM20AQ96MK3 541 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
CLRN1-201ENST00000295911 VPS16Q9H269 839 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
CLRN1-201ENST00000295911 PPP2R2CQ9Y2T4 447 aa10.33□□□□□ -0.76
CLRN1-201ENST00000295911 CNTNAP1P78357 1384 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CLRN2A0PK11 232 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 GRXCR2A6NFK2 248 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 LGALS16A8MUM7 142 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 MFAP3LO75121 409 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CYP3A4P08684 503 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CCDC175P0C221 793 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 FECHP22830 423 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CIITAP33076 1130 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 ARHGAP4P98171 946 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 UBXN1Q04323 297 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 TNIP1Q15025 636 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 SHROOM1Q2M3G4 852 aaPredicted RBP10.32□□□□□ -0.76
CLRN1-201ENST00000295911 HAUS3Q68CZ6 603 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CENPPQ6IPU0 288 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 FAM160B2Q86V87 743 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 IRF2BP1Q8IU81 584 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CREBRFQ8IUR6 639 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 REXO1L1PQ8IX06 675 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 GUF1Q8N442 669 aaKnown RBP10.32□□□□□ -0.76
CLRN1-201ENST00000295911 MB21D1Q8N884 522 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 RETREG2Q8NC44 543 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
CLRN1-201ENST00000295911 PDCL3Q9H2J4 239 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms