RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 OATP04181 439 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 H2AFZP0C0S5 128 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 CLCN1P35523 988 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 EVCP57679 992 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 NKX1-1Q15270 411 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 H2AFVQ71UI9 128 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 NEDD9Q14511 834 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 CFAP157Q5JU67 520 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 GOLGA6CA6NDK9 693 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 GOLGA6BA6NDN3 693 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 GOLGA6DP0CG33 693 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 PSMD2Q13200 908 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 GOLGA6AQ9NYA3 693 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 PPP2R5DQ14738 602 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 K7ERI5 159 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 FCER1AP12319 257 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 TFAMQ00059 246 aaKnown RBP19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 PFKFB3Q16875 520 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 CCT6BQ92526 530 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 HAUS1Q96CS2 278 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 TRIM7Q9C029 511 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 ACAD9Q9H845 621 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 EEF1GP26641 437 aaKnown RBP19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 ENAHQ8N8S7 591 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 TUBGCP2Q9BSJ2 902 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 NEDD4P46934 1319 aa19.35■□□□□ 0.69
CDC42EP3-201ENST00000295324 ADKP55263 362 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 TTLL4Q14679 1199 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 RBM46Q8TBY0 533 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 FAM49AQ9H0Q0 323 aaPredicted RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 PCDHB4Q9Y5E5 795 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 MARK3P27448 753 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 STAT3P40763 770 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 KRT76Q01546 638 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 MFSD14CQ5VZR4 134 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 RSRC2Q7L4I2 434 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 TAOK1Q7L7X3 1001 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 SMC6Q96SB8 1091 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 BZW2Q9Y6E2 419 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 WDR64B1ANS9 1081 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 LGSNQ5TDP6 509 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 CROCCP2Q86T23 111 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 TRIM58Q8NG06 486 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP42Q9H9J4 1324 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 DCCP43146 1447 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 ORC4O43929 436 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 NRXN1Q9ULB1 1477 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 COPB1P53618 953 aaKnown RBP19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 MYO1EQ12965 1108 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 GRM4Q14833 912 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 CASC4Q6P4E1 433 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 ANKS4BQ8N8V4 417 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 TRIM31Q9BZY9 425 aa19.34■□□□□ 0.69
CDC42EP3-201ENST00000295324 NTSR2O95665 410 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 PKP1Q13835 747 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 GEN1Q17RS7 908 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 SLFN12LQ6IEE8 588 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 CATSPER4Q7RTX7 472 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 MCPH1Q8NEM0 835 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 NSUN4Q96CB9 384 aaKnown RBP19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 EMILIN3Q9NT22 766 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 DAGLAQ9Y4D2 1042 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 ENTPD3O75355 529 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 AFPP02771 609 aaKnown RBP19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 CSF1RP07333 972 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 SRGAP2CP0DJJ0 459 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 EZH2Q15910 746 aaKnown RBP19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 ZNF658Q5TYW1 1059 aaPredicted RBP19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 ATG9AQ7Z3C6 839 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 NLRP4Q96MN2 994 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 PHLPP2Q6ZVD8 1323 aa19.33■□□□□ 0.69
CDC42EP3-201ENST00000295324 LRRC41Q15345 812 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 ELMSAN1Q6PJG2 1045 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 PCDHB6Q9Y5E3 794 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 STK36Q9NRP7 1315 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 TECPR2O15040 1411 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 GIPC1O14908 333 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 CRCPO75575 148 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 PLCG1P19174 1290 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 NFX1Q12986 1120 aaKnown RBP19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 SLFNL1Q499Z3 407 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 MMP19Q99542 508 aa19.33■□□□□ 0.68
CDC42EP3-201ENST00000295324 CTTNQ14247 550 aaKnown RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 RSBN1LQ6PCB5 846 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 RSAD2Q8WXG1 361 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms