RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 GRB10Q13322 594 aa14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 TDRD12Q587J7 1177 aaKnown RBP14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 NEK8Q86SG6 692 aa14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 IFIH1Q9BYX4 1025 aaKnown RBP14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 HAUS4Q9H6D7 363 aa14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 BLOC1S4Q9NUP1 217 aa14.68□□□□□ -0.06
KCNIP3-201ENST00000295225 KRT86O43790 486 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 FECHP22830 423 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 CCNE1P24864 410 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 SOGA3Q5TF21 947 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 SNRNP27Q8WVK2 155 aaKnown RBP14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 IKZF4Q9H2S9 585 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 PCDHAC2Q9Y5I4 1007 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 KIF5AQ12840 1032 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 SBK1Q52WX2 424 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 MFSD14BQ5SR56 506 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 KCTD16Q68DU8 428 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 PNMA5Q96PV4 448 aa14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
KCNIP3-201ENST00000295225 ATP8B1O43520 1251 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 FTCDO95954 541 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 FAM163BP0C2L3 166 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 EEF1GP26641 437 aaKnown RBP14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 STAT3P40763 770 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 SND1Q7KZF4 910 aaKnown RBP eCLIP14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 SNX29Q8TEQ0 813 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 SELENOOQ9BVL4 669 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 SUN2Q9UH99 717 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 E9PMD0 336 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 MYO1CO00159 1063 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 PSMD14O00487 310 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 ACTN2P35609 894 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 SLC1A4P43007 532 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 KIF11P52732 1056 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 CALCRLQ16602 461 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 REXO1Q8N1G1 1221 aaKnown RBP14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 DDX12PQ92771 950 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 RTFDC1Q9BY42 306 aaPredicted RBP14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 NDST4Q9H3R1 872 aa14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 RTCBQ9Y3I0 505 aaKnown RBP14.66□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L15C9J2P7 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L13C9JLJ4 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L11C9JVI0 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L18D6R9N7 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L22D6RA61 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L17D6RBQ6 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L19D6RCP7 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L20D6RJB6 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 C6orf229H3BNL8 230 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 AKR1B1P15121 316 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 INHBEP58166 350 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L24Q0WX57 530 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 SPA17Q15506 151 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 CCSER1Q9C0I3 900 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 ARHGEF10LQ9HCE6 1279 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 HPCAL4Q9UM19 191 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 BCS1LQ9Y276 419 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 PCDHA13Q9Y5I0 950 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 MEIS1O00470 390 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 FAM200BP0CF97 657 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 RFC4P35249 363 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 CYLC1P35663 651 aaPredicted RBP14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 LEKR1Q6ZMV7 388 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 GOLGA6L1Q8N7Z2 621 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 HNRNPLLQ8WVV9 542 aaKnown RBP14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 EXOC4Q96A65 974 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 PACSIN1Q9BY11 444 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 ZMYND12Q9H0C1 365 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 NARFQ9UHQ1 456 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 JRKLQ9Y4A0 524 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 EIF3JO75822 258 aaKnown RBP14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 ECEL1O95672 775 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 MAGEA8P43361 318 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 GTF2IP78347 998 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 TRIM14Q14142 442 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 SV2BQ7L1I2 683 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 AMOTL1Q8IY63 956 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 SH2D3CQ8N5H7 860 aa14.65□□□□□ -0.06
KCNIP3-201ENST00000295225 AGPSO00116 658 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 BAG3O95817 575 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 ZBED6P86452 979 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 ANKRD2Q9GZV1 360 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 C6orf50Q9HD87 102 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 TRAF5O00463 557 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 PPP1R11O60927 126 aaPredicted RBP14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 ACTN1P12814 892 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 KRT83P78385 493 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 TCP10Q12799 353 aa14.64□□□□□ -0.07
KCNIP3-201ENST00000295225 KCNB1Q14721 858 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms