RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 SLC16A2P36021 539 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 NOVP48745 357 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 CYP27A1Q02318 531 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 PDCLQ13371 301 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 SMCR8Q8TEV9 937 aaPredicted RBP16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 RPGRIP1Q96KN7 1286 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 DNAJC7Q99615 494 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 PCDHA6Q9UN73 950 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 PCDHA8Q9Y5H6 950 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 GDF11O95390 407 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 MB21D1Q8N884 522 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 SMARCAL1Q9NZC9 954 aa16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
LRRTM1-201ENST00000295057 SPAG1Q07617 926 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 INF2Q27J81 1249 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 CNPY4Q8N129 248 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 EEF2KMTQ96G04 330 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 M0R2N6 131 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 TTLL1O95922 423 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 PRCPP42785 496 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 KLK7P49862 253 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 NAPAP54920 295 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 JAG1P78504 1218 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 COA7Q96BR5 231 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 SERPINA10Q9UK55 444 aa16.93■□□□□ 0.3
LRRTM1-201ENST00000295057 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 KRT86O43790 486 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 NT5C2P49902 561 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 ATP1A2P50993 1020 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 KCTD16Q68DU8 428 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 PRPF38AQ8NAV1 312 aaKnown RBP16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 EHD2Q9NZN4 543 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 NDUFAB1O14561 156 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 CREG2Q8IUH2 290 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 PSMB7Q99436 277 aa16.92■□□□□ 0.3
LRRTM1-201ENST00000295057 CALML3P27482 149 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 FNTAP49354 379 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 RRP1BQ14684 758 aaKnown RBP16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 PDXDC2PQ6P474 469 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 JPH2Q9BR39 696 aaPredicted RBP16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 CAPN11Q9UMQ6 739 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 GOLGA8KD6RF30 607 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 KRT83P78385 493 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 SEPT2Q15019 361 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 GBP6Q6ZN66 633 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 NHEJ1Q9H9Q4 299 aaPredicted RBP16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 TMEM260Q9NX78 707 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 PI4KBQ9UBF8 816 aa16.91■□□□□ 0.3
LRRTM1-201ENST00000295057 CCDC194A0A1B0GVG4 234 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 ZEB2O60315 1214 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 TSR1Q2NL82 804 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 ZNF658Q5TYW1 1059 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 EEF2P13639 858 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 CXCR5P32302 372 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 SETQ01105 290 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 DHX37Q8IY37 1157 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 ZNF646O15015 1829 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-201ENST00000295057 RASSF10A6NK89 507 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 B4DLN1 442 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 H0YHG0 523 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 KRT14P02533 472 aa16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.3
LRRTM1-201ENST00000295057 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms