RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 CYP2W1Q8TAV3 490 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 VTI1AQ96AJ9 217 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
VPS28-201ENST00000292510 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 STARD7Q9NQZ5 370 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 PCDHA4Q9UN74 947 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
VPS28-201ENST00000292510 FIBPO43427 364 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 ZEB2O60315 1214 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 GGPS1O95749 300 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 ICAM3P32942 547 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 CPT1AP50416 773 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 RTP1P59025 263 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 ARHGAP4P98171 946 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 NPY5RQ15761 445 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 TRIM60Q495X7 471 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 KCNV1Q6PIU1 500 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.04
VPS28-201ENST00000292510 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
VPS28-201ENST00000292510 A6NJR5 290 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 ATP9AO75110 1047 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 MMP3P08254 477 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 TGFB3P10600 412 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 PSMC6P62333 389 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 PURAQ00577 322 aaKnown RBP15.26■□□□□ 0.03
VPS28-201ENST00000292510 CELF3Q5SZQ8 465 aaKnown RBP15.26■□□□□ 0.03
VPS28-201ENST00000292510 MYSM1Q5VVJ2 828 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 NLRX1Q86UT6 975 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 PPP1R13LQ8WUF5 828 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 GPRASP2Q96D09 838 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 GLT1D1Q96MS3 346 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 MXRA8Q9BRK3 442 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 PHF20Q9BVI0 1012 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
VPS28-201ENST00000292510 ZMYND8Q9ULU4 1186 aaPredicted RBP15.26■□□□□ 0.03
VPS28-201ENST00000292510 TELO2Q9Y4R8 837 aa15.26■□□□□ 0.03
VPS28-201ENST00000292510 H0YGN5 161 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 M0R2N6 131 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 EDIL3O43854 480 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 MTMR1Q13613 665 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 LAMC2Q13753 1193 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 SNX17Q15036 470 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 HSDL1Q3SXM5 330 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 CYFIP1Q7L576 1253 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 OXER1Q8TDS5 423 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 CRYGNQ8WXF5 182 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 WASF1Q92558 559 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 EMID1Q96A84 441 aaPredicted RBP15.25■□□□□ 0.03
VPS28-201ENST00000292510 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
VPS28-201ENST00000292510 GRIN2DO15399 1336 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 ELP1O95163 1332 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 A0A0U1RQG5 324 aaPredicted RBP15.24■□□□□ 0.03
VPS28-201ENST00000292510 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 PQBP1O60828 265 aaKnown RBP15.24■□□□□ 0.03
VPS28-201ENST00000292510 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 ARP10275 920 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 KCNA2P16389 499 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 SYN1P17600 705 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 XBP1P17861 261 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 ZNF76P36508 570 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 SP4Q02446 784 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
VPS28-201ENST00000292510 MCTP2Q6DN12 878 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 PPTC7Q8NI37 304 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 UIMC1Q96RL1 719 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 NR2E3Q9Y5X4 410 aa15.24■□□□□ 0.03
VPS28-201ENST00000292510 ARVCFO00192 962 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 MEIS1O00470 390 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 CABYRO75952 493 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 CYP3A4P08684 503 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 CHMP4BP1P59074 171 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 TLE2Q04725 743 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 ITGA7Q13683 1181 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 NEDD9Q14511 834 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 C1orf53Q5VUE5 145 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 METTL7BQ6UX53 244 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
VPS28-201ENST00000292510 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
VPS28-201ENST00000292510 LLPHQ9BRT6 129 aaKnown RBP15.23■□□□□ 0.03
VPS28-201ENST00000292510 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
VPS28-201ENST00000292510 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
VPS28-201ENST00000292510 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 IGLV3-22A0A075B6J6 115 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 ZNF286BP0CG31 522 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 CDK7P50613 346 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 DGKDQ16760 1214 aa15.22■□□□□ 0.03
VPS28-201ENST00000292510 KRT40Q6A162 431 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms