RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 WNK3Q9BYP7 1800 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 FAM86B1E9PN63 330 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 WDR46O15213 610 aaKnown RBP10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 FAM86B2P0C5J1 330 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 TRAPPC10P48553 1259 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 CYP2J2P51589 502 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 MTERF2Q49AM1 385 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 CNTNAP1P78357 1384 aa10.04□□□□□ -0.8
CCDC144B-201ENST00000285176 PAK1Q13153 545 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PYM1Q9BRP8 204 aaKnown RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 RABGAP1Q9Y3P9 1069 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 KMT5BQ4FZB7 885 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 CYFIP1Q7L576 1253 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 FBXL16Q8N461 479 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 TEKT3Q9BXF9 490 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 TEX13BQ9BXU2 312 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PANK4Q9NVE7 773 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 CPA4Q9UI42 421 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 SCN7AQ01118 1682 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 FOSP01100 380 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PCIF1Q9H4Z3 704 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 CEP290O15078 2479 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 GLTPD2A6NH11 291 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PRPF6O94906 941 aaKnown RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 FGFR1OPO95684 399 aaKnown RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PLA2G4BP0C869 781 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 GNG11P61952 73 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 GJC2Q5T442 439 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 PLA2G4FQ68DD2 849 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 TAF1DQ9H5J8 278 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 FAM207AQ9NSI2 230 aaPredicted RBP10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 RMND1Q9NWS8 449 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
CCDC144B-201ENST00000285176 FSD2A1L4K1 749 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 NPEPPSP55786 919 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 SOX10P56693 466 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 PSMC6P62333 389 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 IL17AQ16552 155 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 GLT8D2Q9H1C3 349 aa10.02□□□□□ -0.8
CCDC144B-201ENST00000285176 CASQ1P31415 396 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 FKBP1AP62942 108 aaKnown RBP10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 CCDC65Q8IXS2 484 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 ENGASEQ8NFI3 743 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 IL17RAQ96F46 866 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 GBA2Q9HCG7 927 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 CEP350Q5VT06 3117 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 USP2O75604 605 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 NR3C2P08235 984 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 NPY5RQ15761 445 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 SWSAP1Q6NVH7 229 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 LPAR1Q92633 364 aa10.02□□□□□ -0.81
CCDC144B-201ENST00000285176 VWA5AO00534 786 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 MEIS2O14770 477 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 MSH4O15457 936 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 KIF20AO95235 890 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 CYP2B6P20813 491 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 FAM47CQ5HY64 1035 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 TXLNBQ8N3L3 684 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 MRIQ9BWK5 157 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 NLRC4Q9NPP4 1024 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 KCNH7Q9NS40 1196 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 SCN9AQ15858 1988 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 N4BP2Q86UW6 1770 aaPredicted RBP10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 ERLIN1O75477 346 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 ZNF75DP51815 510 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 DHX37Q8IY37 1157 aaKnown RBP10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 CCDC127Q96BQ5 260 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 PRM3Q9NNZ6 103 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 RSPH10B2B2RC85 870 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 RSPH10BP0C881 870 aa10.01□□□□□ -0.81
CCDC144B-201ENST00000285176 OSBPP22059 807 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms