RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CCDC194A0A1B0GVG4 234 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 RBM47A0AV96 593 aaKnown RBP19.84■□□□□ 0.77
ATG3-201ENST00000283290 DNM1LO00429 736 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 ARP10275 920 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 ZNF76P36508 570 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 CCDC62Q6P9F0 684 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 SCFD2Q8WU76 684 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 CRYGNQ8WXF5 182 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 GJA10Q969M2 543 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 INPP4AQ96PE3 977 aaPredicted RBP19.84■□□□□ 0.77
ATG3-201ENST00000283290 UBIAD1Q9Y5Z9 338 aa19.84■□□□□ 0.77
ATG3-201ENST00000283290 ATP9AO75110 1047 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 TDP2O95551 362 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 C6orf222P0C671 652 aaPredicted RBP19.83■□□□□ 0.77
ATG3-201ENST00000283290 COL6A1P12109 1028 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 ATP2B1P20020 1258 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 SP4Q02446 784 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 TTLL4Q14679 1199 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 NONOQ15233 471 aaKnown RBP eCLIP19.83■□□□□ 0.77
ATG3-201ENST00000283290 DUSP28Q4G0W2 176 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 LARP1BQ659C4 914 aaKnown RBP19.83■□□□□ 0.77
ATG3-201ENST00000283290 GALNT17Q6IS24 598 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 MXRA8Q9BRK3 442 aa19.83■□□□□ 0.77
ATG3-201ENST00000283290 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.77
ATG3-201ENST00000283290 KBTBD13C9JR72 458 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 HSP90AA1P07900 732 aaKnown RBP19.83■□□□□ 0.76
ATG3-201ENST00000283290 UBA1P22314 1058 aaKnown RBP19.83■□□□□ 0.76
ATG3-201ENST00000283290 LETM2Q2VYF4 491 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 MCTP1Q6DN14 999 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 KRT25Q7Z3Z0 450 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 RNF180Q86T96 592 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 PPP1R13LQ8WUF5 828 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 UPF3AQ9H1J1 476 aaKnown RBP19.83■□□□□ 0.76
ATG3-201ENST00000283290 BRMS1Q9HCU9 246 aa19.83■□□□□ 0.76
ATG3-201ENST00000283290 CTAGE5O15320 804 aa19.82■□□□□ 0.76
ATG3-201ENST00000283290 GJA9P57773 515 aa19.82■□□□□ 0.76
ATG3-201ENST00000283290 MTMR1Q13613 665 aa19.82■□□□□ 0.76
ATG3-201ENST00000283290 PRR16Q569H4 304 aa19.82■□□□□ 0.76
ATG3-201ENST00000283290 SENP6Q9GZR1 1112 aaPredicted RBP19.82■□□□□ 0.76
ATG3-201ENST00000283290 JADE2Q9NQC1 790 aa19.82■□□□□ 0.76
ATG3-201ENST00000283290 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
ATG3-201ENST00000283290 SPATA31C2B4DYI2 1134 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 H3BQV1 296 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 GGPS1O95749 300 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 ARHGAP1Q07960 439 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 GNL2Q13823 731 aaKnown RBP19.81■□□□□ 0.76
ATG3-201ENST00000283290 NBR1Q14596 966 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 CEP55Q53EZ4 464 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 PLA2G4DQ86XP0 818 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 KLHDC9Q8NEP7 349 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
ATG3-201ENST00000283290 IGLV3-22A0A075B6J6 115 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 DDX39AO00148 427 aaKnown RBP19.8■□□□□ 0.76
ATG3-201ENST00000283290 FIBPO43427 364 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 SAFBQ15424 915 aaKnown RBP eCLIP19.8■□□□□ 0.76
ATG3-201ENST00000283290 GNPTABQ3T906 1256 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 FOXD4L5Q5VV16 416 aaPredicted RBP19.8■□□□□ 0.76
ATG3-201ENST00000283290 CYFIP1Q7L576 1253 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 NLRX1Q86UT6 975 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 FOXD4L4Q8WXT5 416 aaPredicted RBP19.8■□□□□ 0.76
ATG3-201ENST00000283290 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
ATG3-201ENST00000283290 SPC25Q9HBM1 224 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 KCNH7Q9NS40 1196 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 PCDH10Q9P2E7 1040 aa19.8■□□□□ 0.76
ATG3-201ENST00000283290 SLC37A4O43826 429 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 CYP3A4P08684 503 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 KCNA10Q16322 511 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 CCSAPQ6IQ19 270 aaPredicted RBP19.79■□□□□ 0.76
ATG3-201ENST00000283290 XRRA1Q6P2D8 792 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
ATG3-201ENST00000283290 FAM177A1Q8N128 213 aaPredicted RBP19.79■□□□□ 0.76
ATG3-201ENST00000283290 AFG1LQ8WV93 481 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 LENG9Q96B70 501 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 HTATIP2Q9BUP3 242 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 AP5M1Q9H0R1 490 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 PHF24Q9UPV7 400 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 KIF3AQ9Y496 699 aa19.79■□□□□ 0.76
ATG3-201ENST00000283290 MEIS1O00470 390 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 CCNT1O60563 726 aaKnown RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 STAM2O75886 525 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 KCNA2P16389 499 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 SYT1P21579 422 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 CST5P28325 142 aaPredicted RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 ITGB3BPQ13352 177 aaPredicted RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 NEK8Q86SG6 692 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 GPRASP2Q96D09 838 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 GH1P01241 217 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 ICAM3P32942 547 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 ATN1P54259 1190 aaPredicted RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 NKX3-2P78367 333 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 FSCN1Q16658 493 aaKnown RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 HSDL1Q3SXM5 330 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 CELF3Q5SZQ8 465 aaKnown RBP19.78■□□□□ 0.76
ATG3-201ENST00000283290 MCTP2Q6DN12 878 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 DPF3Q92784 378 aa19.78■□□□□ 0.76
ATG3-201ENST00000283290 AGO4Q9HCK5 861 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms