RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 TYW1Q9NV66 732 aaKnown RBP12.91□□□□□ -0.34
SHPRH-201ENST00000275233 METP08581 1390 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 CDC37Q16543 378 aaPredicted RBP12.9□□□□□ -0.34
SHPRH-201ENST00000275233 CDO1Q16878 200 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 KCTD6Q8NC69 237 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
SHPRH-201ENST00000275233 KLHL14Q9P2G3 628 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 KRT1P04264 644 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 INHBAP08476 426 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 SUSD4Q5VX71 490 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
SHPRH-201ENST00000275233 SPATA17Q96L03 361 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHPRH-201ENST00000275233 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 GANCQ8TET4 914 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 INPP5FQ9Y2H2 1132 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 IFNAR2P48551 515 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 KIF3CO14782 793 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 RCN2Q14257 317 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 ZSWIM5Q9P217 1185 aa12.9□□□□□ -0.34
SHPRH-201ENST00000275233 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.35
SHPRH-201ENST00000275233 BBOX1O75936 387 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 C2orf54Q08AI8 447 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MAP7D3Q8IWC1 876 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 PASKQ96RG2 1323 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MOCS3O95396 460 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF18P17022 549 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 HSPH1Q92598 858 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CDKL2Q92772 493 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 OSBP2Q969R2 916 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 AIFM3Q96NN9 605 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 COPRSQ9NQ92 184 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 DARS2Q6PI48 645 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 PIGBQ92521 554 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MAN1B1Q9UKM7 699 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MMP10P09238 476 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 SERPINB6P35237 376 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 P2RX5Q93086 422 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 LRRC4Q9HBW1 653 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 PIH1D3Q9NQM4 214 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 FAM196BA6NMK8 535 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 FTCDO95954 541 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CDK8P49336 464 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 NFX1Q12986 1120 aaKnown RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 CDC26Q8NHZ8 85 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
SHPRH-201ENST00000275233 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
SHPRH-201ENST00000275233 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 HP1BP3Q5SSJ5 553 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 IQCB1Q15051 598 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF215Q9UL58 517 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 CPP00450 1065 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ARHGEF6Q15052 776 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 DSTYKQ6XUX3 929 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PSAPP07602 524 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 NSUN7Q8NE18 718 aaKnown RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 RNF217Q8TC41 542 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms