RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 CCDC196A0A1B0GTZ2 297 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 RANBP6O60518 1105 aaKnown RBP8.67□□□□□ -1.02
CDH18-201ENST00000274170 KINO60870 393 aaKnown RBP8.67□□□□□ -1.02
CDH18-201ENST00000274170 PRDM1O75626 825 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 FBXL16Q8N461 479 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 FAM71BQ8TC56 605 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 TEX13BQ9BXU2 312 aa8.67□□□□□ -1.02
CDH18-201ENST00000274170 DNAJC25-GNG10A0A024R161 153 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZSCAN12O43309 604 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
CDH18-201ENST00000274170 PSMA5P28066 241 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 STAT3P40763 770 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 GJA8P48165 433 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 STAT2P52630 851 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 SATB1Q01826 763 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 GHRHRQ02643 423 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
CDH18-201ENST00000274170 ASPRV1Q53RT3 343 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 CCDC73Q6ZRK6 1079 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 SMARCC2Q8TAQ2 1214 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 DHX58Q96C10 678 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 PNKPQ96T60 521 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 FTOQ9C0B1 505 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDH18-201ENST00000274170 PORCNQ9H237 461 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 TAF6LQ9Y6J9 622 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 GOLGA6L9A6NEM1 432 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 IKBKBO14920 756 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 CYP21A2P08686 494 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 PDHBP11177 359 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 FANCCQ00597 558 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZNF543Q08ER8 600 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZRSR1Q15695 479 aaKnown RBP8.66□□□□□ -1.02
CDH18-201ENST00000274170 ATL3Q6DD88 541 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 MAMDC4Q6UXC1 1216 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 CNNM3Q8NE01 707 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 NCOA7Q8NI08 942 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 TMEM106CQ9BVX2 250 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ZSWIM5Q9P217 1185 aa8.66□□□□□ -1.02
CDH18-201ENST00000274170 ALPK3Q96L96 1907 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 CCDC85CA6NKD9 419 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 ARHGAP6O43182 974 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 HMGB1P09429 215 aaKnown RBP8.65□□□□□ -1.02
CDH18-201ENST00000274170 RCAN1P53805 252 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 NKX3-2P78367 333 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 ZNF792Q3KQV3 632 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 MB21D2Q8IYB1 491 aaPredicted RBP8.65□□□□□ -1.02
CDH18-201ENST00000274170 CEP120Q8N960 986 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 ERCC4Q92889 916 aaPredicted RBP8.65□□□□□ -1.02
CDH18-201ENST00000274170 A1CFQ9NQ94 594 aaKnown RBP8.65□□□□□ -1.02
CDH18-201ENST00000274170 KIAA1468Q9P260 1216 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 PFASO15067 1338 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 SYNGAP1Q96PV0 1343 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 KIAA1217Q5T5P2 1943 aa8.65□□□□□ -1.02
CDH18-201ENST00000274170 POTEB2H3BUK9 544 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 MSCO60682 206 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 CUTAO60888 179 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 SHOX2O60902 331 aaPredicted RBP8.65□□□□□ -1.03
CDH18-201ENST00000274170 EIF3JO75822 258 aaKnown RBP8.65□□□□□ -1.03
CDH18-201ENST00000274170 PRPF6O94906 941 aaKnown RBP8.65□□□□□ -1.03
CDH18-201ENST00000274170 FCER1AP12319 257 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 CCL5P13501 91 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 ERCC3P19447 782 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 SLC1A4P43007 532 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 AARSP49588 968 aaKnown RBP eCLIP8.65□□□□□ -1.03
CDH18-201ENST00000274170 TRDNQ13061 729 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 TRAF1Q13077 416 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.03
CDH18-201ENST00000274170 KRT32Q14532 448 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 VSTM4Q8IW00 320 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 FSIP1Q8NA03 581 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 MORC4Q8TE76 937 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 MTMR8Q96EF0 704 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 DDX11Q96FC9 970 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 TMEM87BQ96K49 555 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 USP28Q96RU2 1077 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 MAP3K20Q9NYL2 800 aaKnown RBP8.65□□□□□ -1.03
CDH18-201ENST00000274170 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 ZNF536O15090 1300 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 NID2Q14112 1375 aa8.65□□□□□ -1.03
CDH18-201ENST00000274170 A0A1W2PQ27 194 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 A0A1W2PQ64 194 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 A0A1W2PQD8 194 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 E7EWF7 191 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 INHAP05111 366 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 ICAM1P05362 532 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 HNRNPH1P31943 449 aaKnown RBP8.64□□□□□ -1.03
CDH18-201ENST00000274170 NLRP12P59046 1061 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
CDH18-201ENST00000274170 DNAJC21Q5F1R6 531 aaKnown RBP8.64□□□□□ -1.03
CDH18-201ENST00000274170 BLOC1S2Q6QNY1 142 aa8.64□□□□□ -1.03
CDH18-201ENST00000274170 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
CDH18-201ENST00000274170 ENAHQ8N8S7 591 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms