RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCDC172P0C7W6 258 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 SCP2P22307 547 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 ERVK-9P63128 1117 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 TMED8Q6PL24 325 aaPredicted RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 NOVA2Q9UNW9 492 aaKnown RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 COL1A1P02452 1464 aaPredicted RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 GCOM1H8Y6P7 765 aaPredicted RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 FSBPO95073 299 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 MYZAPP0CAP1 466 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 HSD17B3P37058 310 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 CDK17Q00537 523 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 SLC9C1Q4G0N8 1177 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 SFMBT2Q5VUG0 894 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 CENPPQ6IPU0 288 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 KCNK18Q7Z418 384 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC84Q86UT8 332 aaPredicted RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 SLC51AQ86UW1 340 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 MDM1Q8TC05 714 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 NSUN4Q96CB9 384 aaKnown RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 NEUROG2Q9H2A3 272 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 MAD2L2Q9UI95 211 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 STXBP3O00186 592 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 DNM1LO00429 736 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 RPSAP08865 295 aaKnown RBP14.21□□□□□ -0.13
COL8A1-202ENST00000273342 TSPY3P0CV98 308 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 TSPY8P0CW00 308 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 AMPD3Q01432 767 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 FGFBP2Q9BYJ0 223 aa14.21□□□□□ -0.13
COL8A1-202ENST00000273342 KLRF2D3W0D1 207 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 ACTN1P12814 892 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 ITIH3Q06033 890 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 FIGNQ5HY92 759 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 TAF4BQ92750 862 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 DDX20Q9UHI6 824 aaKnown RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 SUFUQ9UMX1 484 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 FAM107AO95990 144 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 HNRNPH3P31942 346 aaKnown RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 KLHL30Q0D2K2 578 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 N4BP2L2Q92802 583 aaPredicted RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 TBC1D31Q96DN5 1066 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 CNOT8Q9UFF9 292 aaKnown RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 M0R2N6 131 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 NONOQ15233 471 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 FAM182BQ5T319 152 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 ZNF572Q7Z3I7 529 aaPredicted RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 DDX12PQ92771 950 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 CELF1Q92879 486 aaKnown RBP14.2□□□□□ -0.14
COL8A1-202ENST00000273342 OSBPL7Q9BZF2 842 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 AMACRQ9UHK6 382 aa14.2□□□□□ -0.14
COL8A1-202ENST00000273342 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 COL18A1P39060 1754 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 TDP2O95551 362 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 ITGA4P13612 1032 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 COPB2P35606 906 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 GRB10Q13322 594 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 ASTE1Q2TB18 679 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 UHMK1Q8TAS1 419 aaKnown RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 LARP4BQ92615 738 aaKnown RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 BARHL2Q9NY43 387 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 FBXL5Q9UKA1 691 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 DAPK3O43293 454 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 ORC4O43929 436 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 MAGOHP61326 146 aaKnown RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
COL8A1-202ENST00000273342 UAP1Q16222 522 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 MAGOHBQ96A72 148 aaKnown RBP14.19□□□□□ -0.14
COL8A1-202ENST00000273342 DUOX1Q9NRD9 1551 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 NPHP3-ACAD11A0A0J9YXS1 232 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 TLDC2A0PJX2 215 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 GMNCA6NCL1 334 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 CHUKO15111 745 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 NOL4O94818 638 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 MYL1P05976 194 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 EPS15P42566 896 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 GLE1Q53GS7 698 aaKnown RBP14.18□□□□□ -0.14
COL8A1-202ENST00000273342 CPLX4Q7Z7G2 160 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 USP38Q8NB14 1042 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 SNX29Q8TEQ0 813 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
COL8A1-202ENST00000273342 SLC37A4O43826 429 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 MARCH6O60337 910 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 KRT71Q3SY84 523 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 ERFEQ4G0M1 354 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 LRRC55Q6ZSA7 311 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 TXNRD3Q86VQ6 643 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms