RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 PCDHA1Q9Y5I3 950 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
PRDM16-201ENST00000270722 EPHB1P54762 984 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 SUN1O94901 812 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 OCM2P0CE71 109 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 OCMP0CE72 109 aaPredicted RBP14.3□□□□□ -0.12
PRDM16-201ENST00000270722 ALAS1P13196 640 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 C16orf72Q14CZ0 275 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 STAMBPL1Q96FJ0 436 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 OSBPL9Q96SU4 736 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 MRPL47Q9HD33 250 aaKnown RBP14.3□□□□□ -0.12
PRDM16-201ENST00000270722 DISC1Q9NRI5 854 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 SBNO1A3KN83 1393 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 HNRNPDLO14979 420 aaKnown RBP14.3□□□□□ -0.12
PRDM16-201ENST00000270722 SERPINB6P35237 376 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 CABP7Q86V35 215 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 MYO1FO00160 1098 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 GNGT2O14610 69 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 SLITRK6Q9H5Y7 841 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 CAB39Q9Y376 341 aaPredicted RBP14.3□□□□□ -0.12
PRDM16-201ENST00000270722 PIK3CAP42336 1068 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 NEUROG2Q9H2A3 272 aa14.3□□□□□ -0.12
PRDM16-201ENST00000270722 B4E1Z4 1266 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 XAGE2Q96GT9 111 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 MAGEB5Q9BZ81 275 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 CHGBP05060 677 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 KARSQ15046 597 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TRPC5Q9UL62 973 aaPredicted RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 E2F4Q16254 413 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TBC1D19Q8N5T2 526 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 PLIN2Q99541 437 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 AKT3Q9Y243 479 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 SMCO2A6NFE2 343 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 ANXA1P04083 346 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 AK2P54819 239 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 MFAP3P55082 362 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TCP10Q12799 353 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 ARHGDIAP52565 204 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 STAT2P52630 851 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TNNI3KQ59H18 835 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TTBK2Q6IQ55 1244 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 ST13P5Q8NFI4 369 aaPredicted RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 MMTAG2Q9BU76 263 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 KRT82Q9NSB4 513 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 FPGT-TNNI3KV9GXZ4 949 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 GOLGA8IPA6NC78 632 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 E2F5Q15329 346 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 LONRF2Q1L5Z9 754 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 COPB2P35606 906 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 TRIM15Q9C019 465 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 VPS16Q9H269 839 aa14.29□□□□□ -0.12
PRDM16-201ENST00000270722 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
PRDM16-201ENST00000270722 MYL1P05976 194 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 CARSP49589 748 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 STX12Q86Y82 276 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 DPYSL4O14531 572 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 DIAPH2O60879 1101 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 TCP1P17987 556 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 SIX6OS1Q8N1H7 587 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 DEAF1O75398 565 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 ADCY3O60266 1144 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 ATF2P15336 505 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 VCAM1P19320 739 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 CYLC2Q14093 348 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 TMEM206Q9H813 350 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 TUBA4AP68366 448 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 THOC5Q13769 683 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 CNGA2Q16280 664 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 FSCBQ5H9T9 825 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 RAPH1Q70E73 1250 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 THEM5Q8N1Q8 247 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 ZBTB18Q99592 522 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 STXBP3O00186 592 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
PRDM16-201ENST00000270722 NELFBQ8WX92 580 aa14.28□□□□□ -0.12
PRDM16-201ENST00000270722 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms