RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PLA2G4BP0C869 781 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 SPATA31C1P0DKV0 1188 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 VCAM1P19320 739 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 LMNB1P20700 586 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 RPA1P27694 616 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 GHRHRQ02643 423 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 PSMD2Q13200 908 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 MTMR2Q13614 643 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 NCAPH2Q6IBW4 605 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 CENPPQ6IPU0 288 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 ERMNQ8TAM6 284 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 PRIMPOLQ96LW4 560 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 VPS16Q9H269 839 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 SLC38A10Q9HBR0 1119 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 STK24Q9Y6E0 443 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 UTRNP46939 3433 aa18.56■□□□□ 0.56
CCDC40-201ENST00000269318 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 ADKP55263 362 aaKnown RBP18.55■□□□□ 0.56
CCDC40-201ENST00000269318 POTEGQ6S5H5 508 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 POTEEQ6S8J3 1075 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 GUF1Q8N442 669 aaKnown RBP18.55■□□□□ 0.56
CCDC40-201ENST00000269318 CSGALNACT2Q8N6G5 542 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 CLEC4DQ8WXI8 215 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 SEMA6BQ9H3T3 888 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 EHMT1Q9H9B1 1298 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 TRMT1Q9NXH9 659 aaKnown RBP18.55■□□□□ 0.56
CCDC40-201ENST00000269318 IDEP14735 1019 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 SLC12A3P55017 1021 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 ARHGAP27Q6ZUM4 889 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
CCDC40-201ENST00000269318 TNNT1P13805 278 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 CYP11B2P19099 503 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 HIRAP54198 1017 aaPredicted RBP18.54■□□□□ 0.56
CCDC40-201ENST00000269318 USP14P54578 494 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 COASYQ13057 564 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 SLC5A5Q92911 643 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 ZKSCAN4Q969J2 545 aaPredicted RBP18.54■□□□□ 0.56
CCDC40-201ENST00000269318 BAG1Q99933 345 aaPredicted RBP18.54■□□□□ 0.56
CCDC40-201ENST00000269318 TANGO6Q9C0B7 1094 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
CCDC40-201ENST00000269318 AKR1B15C9JRZ8 316 aaPredicted RBP18.53■□□□□ 0.56
CCDC40-201ENST00000269318 NFIBO00712 420 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 ARHGAP6O43182 974 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 STX10O60499 249 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PSMD10O75832 226 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PTPRAP18433 802 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 BACE1P56817 501 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 UBXN2AP68543 259 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 RBL2Q08999 1139 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 SPP2Q13103 211 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 CEP55Q53EZ4 464 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PPP1R13BQ96KQ4 1090 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PANX2Q96RD6 677 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 WRNIP1Q96S55 665 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 POLR3CQ9BUI4 534 aaPredicted RBP18.53■□□□□ 0.56
CCDC40-201ENST00000269318 BMP2KQ9NSY1 1161 aaPredicted RBP18.53■□□□□ 0.56
CCDC40-201ENST00000269318 GGA3Q9NZ52 723 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 COL20A1Q9P218 1284 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 RPTORQ8N122 1335 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 LGALS16A8MUM7 142 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 EML1O00423 815 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 FLOT1O75955 427 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 GYPCP04921 128 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC40-201ENST00000269318 TPM2P07951 284 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 EPS15P42566 896 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 ARSHQ5FYA8 562 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 OTOP1Q7RTM1 612 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 GPBP1Q86WP2 473 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 GLIS3Q8NEA6 775 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PANK4Q9NVE7 773 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 PPP2R3BQ9Y5P8 575 aa18.53■□□□□ 0.56
CCDC40-201ENST00000269318 FRMD3A2A2Y4 597 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 MEIS1O00470 390 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PSMC6P62333 389 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PPP2R5CQ13362 524 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 FOXR2Q6PJQ5 311 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PPFIBP1Q86W92 1011 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 ZNF280CQ8ND82 737 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 ZNF507Q8TCN5 953 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 MAGEC2Q9UBF1 373 aaPredicted RBP18.52■□□□□ 0.56
CCDC40-201ENST00000269318 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PARP14Q460N5 1801 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PITPNM2Q9BZ72 1349 aa18.52■□□□□ 0.56
CCDC40-201ENST00000269318 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 CREBRFQ8IUR6 639 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 SYT2Q8N9I0 419 aaPredicted RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 EIF2AK1Q9BQI3 630 aaKnown RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 SPON1Q9HCB6 807 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 RAVER2Q9HCJ3 691 aaKnown RBP18.51■□□□□ 0.55
CCDC40-201ENST00000269318 RABGAP1Q9Y3P9 1069 aa18.51■□□□□ 0.55
CCDC40-201ENST00000269318 SBF1O95248 1867 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 350 ms