RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PTPROQ16827 1216 aa15.03■□□□□ -0
NPC1-201ENST00000269228 DAAM2Q86T65 1068 aa15.03■□□□□ -0
NPC1-201ENST00000269228 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
NPC1-201ENST00000269228 PARP2Q9UGN5 583 aa15.03■□□□□ -0
NPC1-201ENST00000269228 NUB1Q9Y5A7 615 aa15.03■□□□□ -0
NPC1-201ENST00000269228 ACTN4O43707 911 aaKnown RBP15.03■□□□□ -0
NPC1-201ENST00000269228 MYL1P05976 194 aa15.03■□□□□ -0
NPC1-201ENST00000269228 GYS1P13807 737 aa15.03■□□□□ -0
NPC1-201ENST00000269228 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
NPC1-201ENST00000269228 PIGOQ8TEQ8 1089 aa15.03■□□□□ -0
NPC1-201ENST00000269228 DISC1Q9NRI5 854 aa15.03■□□□□ -0
NPC1-201ENST00000269228 ASIC3Q9UHC3 531 aa15.03■□□□□ -0
NPC1-201ENST00000269228 PTPN21Q16825 1174 aa15.03■□□□□ -0
NPC1-201ENST00000269228 STYK1Q6J9G0 422 aa15.03■□□□□ -0
NPC1-201ENST00000269228 SGMS1Q86VZ5 419 aa15.03■□□□□ -0
NPC1-201ENST00000269228 HMGCS2P54868 508 aa15.02■□□□□ -0
NPC1-201ENST00000269228 TUBB2AQ13885 445 aa15.02■□□□□ -0
NPC1-201ENST00000269228 CCDC14Q49A88 953 aa15.02■□□□□ -0
NPC1-201ENST00000269228 DNAJC21Q5F1R6 531 aaKnown RBP15.02■□□□□ -0
NPC1-201ENST00000269228 ERO1AQ96HE7 468 aa15.02■□□□□ -0
NPC1-201ENST00000269228 ZNF512BQ96KM6 892 aaPredicted RBP15.02■□□□□ -0
NPC1-201ENST00000269228 PLCD4Q9BRC7 762 aa15.02■□□□□ -0
NPC1-201ENST00000269228 RIOK1Q9BRS2 568 aaKnown RBP15.02■□□□□ -0
NPC1-201ENST00000269228 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
NPC1-201ENST00000269228 PSMD14O00487 310 aa15.02■□□□□ -0
NPC1-201ENST00000269228 ARHGAP4P98171 946 aa15.02■□□□□ -0
NPC1-201ENST00000269228 IFRD2Q12894 506 aaPredicted RBP15.02■□□□□ -0
NPC1-201ENST00000269228 PPP1R21Q6ZMI0 780 aa15.02■□□□□ -0
NPC1-201ENST00000269228 GPR161Q8N6U8 529 aaKnown RBP15.02■□□□□ -0
NPC1-201ENST00000269228 NT5C1BQ96P26 610 aa15.02■□□□□ -0
NPC1-201ENST00000269228 AMFRQ9UKV5 643 aa15.02■□□□□ -0
NPC1-201ENST00000269228 STAMBPO95630 424 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 GAS8O95995 478 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 EEF1GP26641 437 aaKnown RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 RSBN1LQ6PCB5 846 aaPredicted RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 SLC16A10Q8TF71 515 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 ATRIPQ8WXE1 791 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 TMEM206Q9H813 350 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 ABCB11O95342 1321 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 SFI1A8K8P3 1242 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 TLR3O15455 904 aaKnown RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 ABL1P00519 1130 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 SRGAP2CP0DJJ0 459 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 CASP14P31944 242 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 UAP1Q16222 522 aaPredicted RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 CLEC10AQ8IUN9 316 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 NSUN6Q8TEA1 469 aaKnown RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 BARHL2Q9NY43 387 aa15.02□□□□□ -0.01
NPC1-201ENST00000269228 UTP11Q9Y3A2 253 aaKnown RBP15.02□□□□□ -0.01
NPC1-201ENST00000269228 ZEB2O60315 1214 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 OSTNP61366 133 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 KMT5BQ4FZB7 885 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 SCYL2Q6P3W7 929 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 ZBTB33Q86T24 672 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 EXOC8Q8IYI6 725 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 BUB1O43683 1085 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 FERP16591 822 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 PTPREP23469 700 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 ABI1Q8IZP0 508 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 TDRD7Q8NHU6 1098 aaKnown RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 STIM2Q9P246 746 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 STK10O94804 968 aaKnown RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 CFAP221Q4G0U5 840 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 HHIPL2Q6UWX4 724 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 CCDC105Q8IYK2 499 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 KCNK9Q9NPC2 374 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 ZNF70Q9UC06 446 aaPredicted RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 CAPN9O14815 690 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 H2AFZP0C0S5 128 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 KLRK1P26718 216 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 H2AFVQ71UI9 128 aa15.01□□□□□ -0.01
NPC1-201ENST00000269228 MRRFQ96E11 262 aaKnown RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 FAM49AQ9H0Q0 323 aaPredicted RBP15.01□□□□□ -0.01
NPC1-201ENST00000269228 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
NPC1-201ENST00000269228 TFAMQ00059 246 aaKnown RBP15□□□□□ -0.01
NPC1-201ENST00000269228 TSGA10IPQ3SY00 556 aa15□□□□□ -0.01
NPC1-201ENST00000269228 ANKRD13CQ8N6S4 541 aa15□□□□□ -0.01
NPC1-201ENST00000269228 NLRP4Q96MN2 994 aa15□□□□□ -0.01
NPC1-201ENST00000269228 SAMSN1Q9NSI8 373 aaKnown RBP15□□□□□ -0.01
NPC1-201ENST00000269228 TSKSQ9UJT2 592 aa15□□□□□ -0.01
NPC1-201ENST00000269228 IKBKBO14920 756 aa15□□□□□ -0.01
NPC1-201ENST00000269228 ATP2C2O75185 946 aa15□□□□□ -0.01
NPC1-201ENST00000269228 CCNE1P24864 410 aa15□□□□□ -0.01
NPC1-201ENST00000269228 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
NPC1-201ENST00000269228 PPP1R18Q6NYC8 613 aa15□□□□□ -0.01
NPC1-201ENST00000269228 RPAP3Q9H6T3 665 aaPredicted RBP15□□□□□ -0.01
NPC1-201ENST00000269228 TTLL3Q9Y4R7 772 aa15□□□□□ -0.01
NPC1-201ENST00000269228 RIOK3O14730 519 aaKnown RBP15□□□□□ -0.01
NPC1-201ENST00000269228 XPOTO43592 962 aaKnown RBP15□□□□□ -0.01
NPC1-201ENST00000269228 DDIT3P35638 169 aa15□□□□□ -0.01
NPC1-201ENST00000269228 MAN2A1Q16706 1144 aa15□□□□□ -0.01
NPC1-201ENST00000269228 PRAMEF18Q5VWM3 479 aa15□□□□□ -0.01
NPC1-201ENST00000269228 KIAA1524Q8TCG1 905 aa15□□□□□ -0.01
NPC1-201ENST00000269228 MTMR4Q9NYA4 1195 aa15□□□□□ -0.01
NPC1-201ENST00000269228 DEPDC5O75140 1603 aa15□□□□□ -0.01
NPC1-201ENST00000269228 STAT3P40763 770 aa15□□□□□ -0.01
NPC1-201ENST00000269228 MFAP3P55082 362 aa15□□□□□ -0.01
NPC1-201ENST00000269228 PTK2Q05397 1052 aa15□□□□□ -0.01
NPC1-201ENST00000269228 CCDC125Q86Z20 511 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms