RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 FLT1P17948 1338 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 PDE8AO60658 829 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 DNAJC8O75937 253 aaPredicted RBP16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 CUL1Q13616 776 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 GKAP1Q5VSY0 366 aaPredicted RBP16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 HPS3Q969F9 1004 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 HVCN1Q96D96 273 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 CNOT8Q9UFF9 292 aaKnown RBP16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 PCDHA4Q9UN74 947 aa16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 PACSIN2Q9UNF0 486 aaPredicted RBP16.96■□□□□ 0.31
SCAMP2-201ENST00000268099 CCDC194A0A1B0GVG4 234 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 PPP1R12AO14974 1030 aaPredicted RBP16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 BCAMP50895 628 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 EHHADHQ08426 723 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 LRCH2Q5VUJ6 765 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 CABP7Q86V35 215 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 CCT6BQ92526 530 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 CARD10Q9BWT7 1032 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 TRMT112Q9UI30 125 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 TMEM59LQ9UK28 342 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 PCDHGC5Q9Y5F6 944 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 GHRP10912 638 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 HSPA2P54652 639 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 COBLL1Q53SF7 1204 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 AGBL2Q5U5Z8 902 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 LUC7LQ9NQ29 371 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
SCAMP2-201ENST00000268099 ABCB11O95342 1321 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 NMT2O60551 498 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 RTN2O75298 545 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 KLRC1P26715 233 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 EDEM3Q9BZQ6 932 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 GBP2P32456 591 aaPredicted RBP16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 CPLX4Q7Z7G2 160 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 MYH7BA7E2Y1 1941 aa16.94■□□□□ 0.3
SCAMP2-201ENST00000268099 MYH4Q9Y623 1939 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 LAD1O00515 517 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 ATP6V1G2O95670 118 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 FGRP09769 529 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 ELF3P78545 371 aaPredicted RBP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 INF2Q27J81 1249 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 TCP11L1Q9NUJ3 509 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 NOVA2Q9UNW9 492 aaKnown RBP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 M0R2N6 131 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 ORC4O43929 436 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 RPSAP08865 295 aaKnown RBP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 PCP11498 1178 aaKnown RBP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 DRD4P21917 467 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 PRPHP41219 470 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 TXNRD1Q16881 649 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 DDX42Q86XP3 938 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 UBLCP1Q8WVY7 318 aaPredicted RBP16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 NOD2Q9HC29 1040 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 NLRC4Q9NPP4 1024 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 FBXL5Q9UKA1 691 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
SCAMP2-201ENST00000268099 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 SERPING1P05155 500 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 NAA25Q14CX7 972 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 TAF4BQ92750 862 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 NEUROG2Q9H2A3 272 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 DCDC2CA8MYV0 355 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 TLR2O60603 784 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 FGFR1OPO95684 399 aaKnown RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 SLC8A3P57103 927 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 MAGOHP61326 146 aaKnown RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 AMPD3Q01432 767 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 MTMR3Q13615 1198 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 MAGOHBQ96A72 148 aaKnown RBP16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 AK8Q96MA6 479 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 BRIP1Q9BX63 1249 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 SLC24A3Q9HC58 644 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
SCAMP2-201ENST00000268099 CES2O00748 559 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms