RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 NFE2L3Q9Y4A8 694 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 RHOBTB3O94955 611 aa23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 ATP1A3P13637 1013 aa23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 CEP55Q53EZ4 464 aa23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 EAPPQ56P03 285 aaPredicted RBP23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 KCNK18Q7Z418 384 aa23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 SYTL5Q8TDW5 730 aaPredicted RBP23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 CNKSR2Q8WXI2 1034 aa23.03■■□□□ 1.28
LYSMD2-201ENST00000267838 MYPNQ86TC9 1320 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 SYNRGQ9UMZ2 1314 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 ASIC1P78348 528 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 FANCCQ00597 558 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 NCAPH2Q6IBW4 605 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 ERMNQ8TAM6 284 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 CCDC47Q96A33 483 aaKnown RBP23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 ELP3Q9H9T3 547 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 IFNKQ9P0W0 207 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 VAV3Q9UKW4 847 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 STK24Q9Y6E0 443 aa23.02■■□□□ 1.28
LYSMD2-201ENST00000267838 SETQ01105 290 aaPredicted RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 ANKRD13AQ8IZ07 590 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 C17orf53Q8N3J3 647 aaPredicted RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 XPO4Q9C0E2 1151 aaKnown RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 LRRC27Q9C0I9 530 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 RNF146Q9NTX7 359 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 HOXC10Q9NYD6 342 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 RIPK3Q9Y572 518 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 POTECB2RU33 542 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 PTGS1P23219 599 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 RPS6P62753 249 aaKnown RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 TTLL12Q14166 644 aaPredicted RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 SPATA1Q5VX52 437 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 SNRNP48Q6IEG0 339 aaKnown RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 SLC5A5Q92911 643 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 ZNF214Q9UL59 606 aaPredicted RBP23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 KIAA1024Q9UPX6 916 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 CTNND2Q9UQB3 1225 aa23.01■■□□□ 1.27
LYSMD2-201ENST00000267838 POTEB3A0JP26 581 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 MYMKA6NI61 221 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 SPDYE16A6NNV3 312 aaPredicted RBP23■■□□□ 1.27
LYSMD2-201ENST00000267838 MEIS1O00470 390 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 ATP2A1O14983 1001 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 MED24O75448 989 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 STX17P56962 302 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 PPATQ06203 517 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 TMEM132BQ14DG7 1078 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 POTEBQ6S5H4 581 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 RNF207Q6ZRF8 634 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 MXRA8Q9BRK3 442 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 EXOC1Q9NV70 894 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 FRMPD4Q14CM0 1322 aa23■■□□□ 1.27
LYSMD2-201ENST00000267838 ZNF18P17022 549 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PRCPP42785 496 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 LRCH2Q5VUJ6 765 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 SLC30A10Q6XR72 485 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 MOB2Q70IA6 237 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 ERO1BQ86YB8 467 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 GIMAP8Q8ND71 665 aaPredicted RBP22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 ZFP91Q96JP5 570 aaPredicted RBP22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 CLMNQ96JQ2 1002 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 RWDD2AQ9UIY3 292 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 LOC285556D6RIA3 1793 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PSMD10O75832 226 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 SERPINC1P01008 464 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PDE4DQ08499 809 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PAK1Q13153 545 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 TREML2Q5T2D2 321 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 PCNX4Q63HM2 1172 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 CNNM4Q6P4Q7 775 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 NSMFQ6X4W1 530 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 CCDC186Q7Z3E2 898 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 ADSSL1Q8N142 457 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 OTUD5Q96G74 571 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 TAAR1Q96RJ0 339 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 GTPBP4Q9BZE4 634 aaKnown RBP22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 NRBP1Q9UHY1 535 aa22.99■■□□□ 1.27
LYSMD2-201ENST00000267838 E9PMD0 336 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 ARP10275 920 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 RPA1P27694 616 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 OTOP1Q7RTM1 612 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 CATSPER3Q86XQ3 398 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 IL31RAQ8NI17 732 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 ZNF577Q9BSK1 485 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 TEX13BQ9BXU2 312 aa22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 SAMSN1Q9NSI8 373 aaKnown RBP22.98■■□□□ 1.27
LYSMD2-201ENST00000267838 PVALEFA0A1B0GWK0 134 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 SPDYE5A6NIY4 337 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 IRF6O14896 467 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 CBFA2T2O43439 604 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 CDK11BP21127 795 aaKnown RBP22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 UBASH3AP57075 661 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 PPP2R5CQ13362 524 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 TKFCQ3LXA3 575 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 HSP90AA4PQ58FG1 418 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 UNC13DQ70J99 1090 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 NIPA1Q7RTP0 329 aa22.97■■□□□ 1.27
LYSMD2-201ENST00000267838 NELFBQ8WX92 580 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms