RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 EPB41L5Q9HCM4 733 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 EHD2Q9NZN4 543 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 MYO1AQ9UBC5 1043 aa21.83■■□□□ 1.09
CSPG5-201ENST00000264723 LIMA1Q9UHB6 759 aaKnown RBP21.83■■□□□ 1.09
CSPG5-201ENST00000264723 CAMTA1Q9Y6Y1 1673 aa21.83■■□□□ 1.08
CSPG5-201ENST00000264723 SARSP49591 514 aaKnown RBP21.83■■□□□ 1.08
CSPG5-201ENST00000264723 TTC31Q49AM3 519 aaPredicted RBP21.83■■□□□ 1.08
CSPG5-201ENST00000264723 PROCA1Q8NCQ7 364 aaPredicted RBP21.83■■□□□ 1.08
CSPG5-201ENST00000264723 EXOC4Q96A65 974 aa21.83■■□□□ 1.08
CSPG5-201ENST00000264723 LRRC53A6NM62 1247 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 BAG6P46379 1132 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 CCDC25Q86WR0 208 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 OTUD6BQ8N6M0 293 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 H3BQF6 201 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 CLIC2O15247 247 aa21.82■■□□□ 1.08
CSPG5-201ENST00000264723 RC3H1Q5TC82 1133 aaKnown RBP21.82■■□□□ 1.08
CSPG5-201ENST00000264723 UHMK1Q8TAS1 419 aaKnown RBP21.82■■□□□ 1.08
CSPG5-201ENST00000264723 GOLGA6L7A0A1B0GV03 622 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 SFI1A8K8P3 1242 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 GGCXP38435 758 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 RPS6KA1Q15418 735 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 LACRTQ9GZZ8 138 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 SWAP70Q9UH65 585 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 BMP3P12645 472 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 CDC37Q16543 378 aaPredicted RBP21.81■■□□□ 1.08
CSPG5-201ENST00000264723 IFT20Q8IY31 132 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 TRIM9Q9C026 710 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 DAGLAQ9Y4D2 1042 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 ADRA2BP18089 450 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 PPANQ9NQ55 473 aaKnown RBP21.81■■□□□ 1.08
CSPG5-201ENST00000264723 CLEC11AQ9Y240 323 aa21.81■■□□□ 1.08
CSPG5-201ENST00000264723 HGSO14964 777 aaPredicted RBP21.8■■□□□ 1.08
CSPG5-201ENST00000264723 FLOT1O75955 427 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 TNNC1P63316 161 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 VWA3BQ502W6 1294 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 BARHL2Q9NY43 387 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 RNF225M0QZC1 329 aaPredicted RBP21.8■■□□□ 1.08
CSPG5-201ENST00000264723 TBX2Q13207 712 aaPredicted RBP21.8■■□□□ 1.08
CSPG5-201ENST00000264723 MAN2A1Q16706 1144 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 U2AF1L4Q8WU68 220 aaKnown RBP21.8■■□□□ 1.08
CSPG5-201ENST00000264723 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 E9PMD0 336 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 DPH5Q9H2P9 285 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 CACNA1FO60840 1977 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 RIC1Q4ADV7 1423 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 NEDD1Q8NHV4 660 aa21.8■■□□□ 1.08
CSPG5-201ENST00000264723 GCOM1H8Y6P7 765 aaPredicted RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 POLR2MP0CAP2 368 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 NEFHP12036 1026 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 GRM4Q14833 912 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 CEP85LQ5SZL2 805 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 TCP1P17987 556 aaKnown RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 NR2F2P24468 414 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 RCAN1P53805 252 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 MTA3Q9BTC8 594 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 MED4Q9NPJ6 270 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 HEXIM1O94992 359 aaKnown RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 EEF2P13639 858 aaKnown RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 KCTD19Q17RG1 926 aaPredicted RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 SELENOSQ9BQE4 189 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 ZNF408Q9H9D4 720 aa21.79■■□□□ 1.08
CSPG5-201ENST00000264723 ARMCX3Q9UH62 379 aaPredicted RBP21.79■■□□□ 1.08
CSPG5-201ENST00000264723 MYO1CO00159 1063 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 PEX26Q7Z412 305 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 MS4A14Q96JA4 679 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 CCPG1Q9ULG6 757 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 FLT1P17948 1338 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 PNMA6FA0A0J9YX94 578 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 FKBP3Q00688 224 aaKnown RBP21.78■■□□□ 1.08
CSPG5-201ENST00000264723 IFI16Q16666 785 aaKnown RBP21.78■■□□□ 1.08
CSPG5-201ENST00000264723 DPH6Q7L8W6 267 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 AK8Q96MA6 479 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 NFU1Q9UMS0 254 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 CCDC172P0C7W6 258 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 DAAM2Q86T65 1068 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 JRKLQ9Y4A0 524 aa21.78■■□□□ 1.08
CSPG5-201ENST00000264723 BIRC3Q13489 604 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 RPGRIP1Q96KN7 1286 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 LRRC1Q9BTT6 524 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 CAPS2Q9BXY5 557 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 ECE2O60344 883 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 RASA1P20936 1047 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 CDKAL1Q5VV42 579 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 CAPN11Q9UMQ6 739 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 LAD1O00515 517 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 IRX5P78411 483 aaPredicted RBP21.77■■□□□ 1.08
CSPG5-201ENST00000264723 PRM3Q9NNZ6 103 aa21.77■■□□□ 1.08
CSPG5-201ENST00000264723 NPHP3-ACAD11A0A0J9YXS1 232 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 STAT3P40763 770 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 GTF2A1P52655 376 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-201ENST00000264723 USP14P54578 494 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 AP1M1Q9BXS5 423 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 DHX36Q9H2U1 1008 aaKnown RBP21.76■■□□□ 1.07
CSPG5-201ENST00000264723 CALUO43852 315 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-201ENST00000264723 XRCC5P13010 732 aaKnown RBP21.76■■□□□ 1.07
CSPG5-201ENST00000264723 LRCH2Q5VUJ6 765 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 FAM178BQ8IXR5 827 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 KDM3AQ9Y4C1 1321 aa21.76■■□□□ 1.07
CSPG5-201ENST00000264723 PPFIA1Q13136 1202 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms