RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 PFASO15067 1338 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 A0A1W2PQJ5 194 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 ESRRGP62508 458 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 CUL3Q13618 768 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 LZICQ8WZA0 190 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 FAM210AQ96ND0 272 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 FOXP3Q9BZS1 431 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 CPP00450 1065 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 AGTP01019 485 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 ALX1Q15699 326 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 MAP2K7O14733 419 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 IFNL3Q8IZI9 196 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 E7ENQ6 273 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 GYS2P54840 703 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 AGGF1Q8N302 714 aaeCLIP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 COMMD10Q9Y6G5 202 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-201ENST00000264709 ABCD1P33897 745 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CDR2Q01850 454 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 PTPRMP28827 1452 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CHRNA3P32297 505 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 BPIFB4P59827 614 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CYFIP2Q96F07 1278 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 PDP2Q9P2J9 529 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ZMYND10O75800 440 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ITGA6P23229 1130 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 SYN2Q92777 582 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 FAF1Q9UNN5 650 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ARHGAP4P98171 946 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 SLC26A4O43511 780 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 PLEKHA4Q9H4M7 779 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 SPEF2Q9C093 1822 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ITIH4Q14624 930 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 FGD4Q96M96 766 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ADCY8P40145 1251 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 ARL2BPQ9Y2Y0 163 aa12.68□□□□□ -0.38
DNMT3A-201ENST00000264709 CNTRLQ7Z7A1 2325 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 MRPS25P82663 173 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 MYO18AQ92614 2054 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 SPATA31D1Q6ZQQ2 1576 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 CAVIN3Q969G5 261 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 NYXQ9GZU5 481 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 H0YCG3 227 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 GMNNO75496 209 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 SPARCL1Q14515 664 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 ZBTB22O15209 634 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 REXO1L1PQ8IX06 675 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 HAUS1Q96CS2 278 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 SESN3P58005 492 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 BIRC2Q13490 618 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 MRGBPQ9NV56 204 aa12.67□□□□□ -0.38
DNMT3A-201ENST00000264709 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 CFAP61Q8NHU2 1237 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 MRPL44Q9H9J2 332 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PDE8AO60658 829 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 HSPA1LP34931 641 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 KPNB1Q14974 876 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 O00370 1275 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 GAP43P17677 238 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 BUB1O43683 1085 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 GUCY1A3Q02108 690 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 AOC3Q16853 763 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 FBXW10Q5XX13 1052 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 TMTC3Q6ZXV5 915 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ACTN3Q08043 901 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 CATSPER1Q8NEC5 780 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PAIP2BQ9ULR5 123 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms