RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 H3BQV1 296 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 TDP2O95551 362 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 GJA8P48165 433 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 TTLL4Q14679 1199 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
SDF4-201ENST00000263741 MYH15Q9Y2K3 1946 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 WNT7AO00755 349 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 TFRCP02786 760 aaKnown RBP20.87■□□□□ 0.93
SDF4-201ENST00000263741 UBA1P22314 1058 aaKnown RBP20.87■□□□□ 0.93
SDF4-201ENST00000263741 MTMR1Q13613 665 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 GNPTABQ3T906 1256 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 DUSP28Q4G0W2 176 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 MCTP2Q6DN12 878 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 MCTP1Q6DN14 999 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 IQSEC1Q6DN90 963 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 XRRA1Q6P2D8 792 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 MXRA8Q9BRK3 442 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
SDF4-201ENST00000263741 WDR81Q562E7 1941 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 VPS37CA5D8V6 355 aaPredicted RBP20.87■□□□□ 0.93
SDF4-201ENST00000263741 MSCO60682 206 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 ARP10275 920 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 BEX3Q00994 111 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
SDF4-201ENST00000263741 CEP55Q53EZ4 464 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 CRISPLD2Q9H0B8 497 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 JADE2Q9NQC1 790 aa20.87■□□□□ 0.93
SDF4-201ENST00000263741 IGLV3-22A0A075B6J6 115 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 DYNC1LI2O43237 492 aaPredicted RBP20.86■□□□□ 0.93
SDF4-201ENST00000263741 FIBPO43427 364 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 ATP9AO75110 1047 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 DUSP11O75319 330 aaKnown RBP20.86■□□□□ 0.93
SDF4-201ENST00000263741 STAM2O75886 525 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 C6orf222P0C671 652 aaPredicted RBP20.86■□□□□ 0.93
SDF4-201ENST00000263741 LETM2Q2VYF4 491 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 PRR16Q569H4 304 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 DIS3LQ8TF46 1054 aaKnown RBP20.86■□□□□ 0.93
SDF4-201ENST00000263741 TELO2Q9Y4R8 837 aa20.86■□□□□ 0.93
SDF4-201ENST00000263741 ADAMTS4O75173 837 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 CYP3A4P08684 503 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 NLRX1Q86UT6 975 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 OR6J1Q8NGC5 347 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 OGDHLQ9ULD0 1010 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 SPATA31C2B4DYI2 1134 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 ATP2B1P20020 1258 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 ARHGAP1Q07960 439 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 PLA2G4DQ86XP0 818 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 GPRASP2Q96D09 838 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 KCNH7Q9NS40 1196 aa20.85■□□□□ 0.93
SDF4-201ENST00000263741 CTAGE5O15320 804 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 GGPS1O95749 300 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 SYT1P21579 422 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 SP4Q02446 784 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 LRRC41Q15345 812 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 NEK8Q86SG6 692 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 FERMT3Q86UX7 667 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 GJA10Q969M2 543 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 LENG9Q96B70 501 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
SDF4-201ENST00000263741 MEIS1O00470 390 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 SLC37A4O43826 429 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 ICAM3P32942 547 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 NOSTRINQ8IVI9 506 aa20.84■□□□□ 0.93
SDF4-201ENST00000263741 ALPK3Q96L96 1907 aa20.83■□□□□ 0.93
SDF4-201ENST00000263741 KCNA2P16389 499 aa20.83■□□□□ 0.93
SDF4-201ENST00000263741 MNX1P50219 401 aaPredicted RBP20.83■□□□□ 0.93
SDF4-201ENST00000263741 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.93
SDF4-201ENST00000263741 GH1P01241 217 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 CIITAP33076 1130 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 USP11P51784 963 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 GJA9P57773 515 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 CYFIP1Q7L576 1253 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 UPF3AQ9H1J1 476 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 AGO4Q9HCK5 861 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 DDX39AO00148 427 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 CCNT1O60563 726 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 ITGB3BPQ13352 177 aaPredicted RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 FSCN1Q16658 493 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 DHX37Q8IY37 1157 aaKnown RBP20.82■□□□□ 0.92
SDF4-201ENST00000263741 AFG1LQ8WV93 481 aa20.82■□□□□ 0.92
SDF4-201ENST00000263741 U2AF2P26368 475 aaKnown RBP eCLIP20.81■□□□□ 0.92
SDF4-201ENST00000263741 GSE1Q14687 1217 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 CELF3Q5SZQ8 465 aaKnown RBP20.81■□□□□ 0.92
SDF4-201ENST00000263741 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
SDF4-201ENST00000263741 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
SDF4-201ENST00000263741 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
SDF4-201ENST00000263741 NKRFO15226 690 aaKnown RBP eCLIP20.81■□□□□ 0.922e-6■■■□□ 17
SDF4-201ENST00000263741 FARP2O94887 1054 aaPredicted RBP20.81■□□□□ 0.92
SDF4-201ENST00000263741 PDCP20941 246 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 PKP1Q13835 747 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 HSDL1Q3SXM5 330 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 MYSM1Q5VVJ2 828 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 POTEDQ86YR6 584 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 MTMR6Q9Y217 621 aa20.81■□□□□ 0.92
SDF4-201ENST00000263741 TGFB3P10600 412 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 SETQ01105 290 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms