RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 AMNQ9BXJ7 453 aa10.43□□□□□ -0.74
LCN1-201ENST00000263598 JMJD4Q9H9V9 463 aa10.43□□□□□ -0.74
LCN1-201ENST00000263598 MAP3K20Q9NYL2 800 aaKnown RBP10.43□□□□□ -0.74
LCN1-201ENST00000263598 COL4A4P53420 1690 aaPredicted RBP10.43□□□□□ -0.74
LCN1-201ENST00000263598 FAM86C2PA6NEL3 165 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 RSPH10B2B2RC85 870 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 B4E1Z4 1266 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 RSPH10BP0C881 870 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 TGFB3P10600 412 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 MYCLP12524 364 aaPredicted RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 HOXD8P13378 290 aaPredicted RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 SDSP20132 328 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 THPOP40225 353 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 ZNF200P98182 395 aaPredicted RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 HDAC1Q13547 482 aaPredicted RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 CELF3Q5SZQ8 465 aaKnown RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 MYSM1Q5VVJ2 828 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 TRAF7Q6Q0C0 670 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
LCN1-201ENST00000263598 SERINC5Q86VE9 423 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 GJD3Q8N144 294 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 SAMD3Q8N6K7 520 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 ENAHQ8N8S7 591 aaPredicted RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 DBF4BQ8NFT6 615 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
LCN1-201ENST00000263598 MRPL38Q96DV4 380 aaKnown RBP10.42□□□□□ -0.74
LCN1-201ENST00000263598 PDCD2LQ9BRP1 358 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 C17orf80Q9BSJ5 609 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 ZSWIM5Q9P217 1185 aa10.42□□□□□ -0.74
LCN1-201ENST00000263598 C17orf102A2RUQ5 167 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 GGPS1O95749 300 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 ALADP13716 330 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 HTRA4P83105 476 aaPredicted RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 GHRHRQ02643 423 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 TRAF1Q13077 416 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 MBTPS1Q14703 1052 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 HSDL1Q3SXM5 330 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 TIGD5Q53EQ6 642 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 PLEKHG4Q58EX7 1191 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 PTCRAQ6ISU1 281 aaPredicted RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 FAM178BQ8IXR5 827 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 TET1Q8NFU7 2136 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.41□□□□□ -0.74
LCN1-201ENST00000263598 ATP6V0A1Q93050 837 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 WNT8BQ93098 351 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 YME1L1Q96TA2 773 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 KRT23Q9C075 422 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 CNNM2Q9H8M5 875 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 MLXIPQ9HAP2 919 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 CD320Q9NPF0 282 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 C11orf16Q9NQ32 467 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 DIAPH3Q9NSV4 1193 aa10.41□□□□□ -0.74
LCN1-201ENST00000263598 TRIP12Q14669 1992 aaPredicted RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 H3BRB1 525 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 HIP1O00291 1037 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 NOP56O00567 594 aaKnown RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 ZBTB5O15062 677 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 SORBS3O60504 671 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 RGS20O76081 388 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 IL9P15248 144 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 CCND2P30279 289 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 PGM5Q15124 567 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 EPC2Q52LR7 807 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 CWC27Q6UX04 472 aaKnown RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 SEPT8Q92599 483 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 C16orf70Q9BSU1 422 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 LNPKQ9C0E8 428 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 TUT1Q9H6E5 874 aaKnown RBP10.4□□□□□ -0.74
LCN1-201ENST00000263598 FAM50BQ9Y247 325 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 NCOR1O75376 2440 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 PTPRSQ13332 1948 aa10.4□□□□□ -0.74
LCN1-201ENST00000263598 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 H3BNC9 293 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 GCOM1H8Y6P7 765 aaPredicted RBP10.39□□□□□ -0.75
LCN1-201ENST00000263598 OPLAHO14841 1288 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 CAND2O75155 1236 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 POLR2MP0CAP2 368 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 GNAT1P11488 350 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
LCN1-201ENST00000263598 HOXA13P31271 388 aaPredicted RBP10.39□□□□□ -0.75
LCN1-201ENST00000263598 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
LCN1-201ENST00000263598 HIC1Q14526 733 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 GNPTABQ3T906 1256 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 APBB2Q92870 758 aa10.39□□□□□ -0.75
LCN1-201ENST00000263598 TOP1MTQ969P6 601 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms