RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 CUL5Q93034 780 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 PRMT1Q99873 361 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 NEFHP12036 1026 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 ITGA4P13612 1032 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 FLT3P36888 993 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 TNNI2P48788 182 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 ATP11AP98196 1134 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 CNNM4Q6P4Q7 775 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 BMP2KQ9NSY1 1161 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 A0A1W2PQC6 194 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 GJA10Q969M2 543 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 PSMD1Q99460 953 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 PDS5AQ29RF7 1337 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CIAO1O76071 339 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CYP2D6P10635 497 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 ERVK-9P63128 1117 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 KLHDC7AQ5VTJ3 777 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CHADLQ6NUI6 762 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CCDC26Q8TAB7 109 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 TACC3Q9Y6A5 838 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CAPN12Q6ZSI9 719 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 SPATA20Q8TB22 786 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 PHF20Q9BVI0 1012 aa17.42■□□□□ 0.38
PRPF40B-201ENST00000261897 ATP6V1G2O95670 118 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 CALML3P27482 149 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 CASP7P55210 303 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 CRYMQ14894 314 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 LMBR1Q8WVP7 490 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 NSRP1Q9H0G5 558 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 CNOT8Q9UFF9 292 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 BCS1LQ9Y276 419 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 FGGP02679 453 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 IL17AQ16552 155 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 ZNF449Q6P9G9 518 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 LRRC34Q8IZ02 419 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 NOP53Q9NZM5 478 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 DBR1Q9UK59 544 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 ITGB3BPQ13352 177 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 IQCKQ8N0W5 287 aa17.41■□□□□ 0.38
PRPF40B-201ENST00000261897 A0A087X0T9 212 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 EME2A4GXA9 379 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 LRRC10BA6NIK2 292 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 A8MUI8 341 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 CAND2O75155 1236 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 FAM228BP0C875 321 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 PKN1Q16512 942 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 SH3RF1Q7Z6J0 888 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 SPICE1Q8N0Z3 855 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 ACTN1P12814 892 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 RBBP5Q15291 538 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 GLE1Q53GS7 698 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 HERC4Q5GLZ8 1057 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 FAM83BQ5T0W9 1011 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 LONP2Q86WA8 852 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 DHTKD1Q96HY7 919 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 FMO2Q99518 471 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 CHORDC1Q9UHD1 332 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 KCNJ2P63252 427 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 CDC37Q16543 378 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 GLG1Q92896 1179 aa17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 DUSP9Q99956 384 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-201ENST00000261897 PGRMC1O00264 195 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 ACSL3O95573 720 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 TFAP4Q01664 338 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 MAN2A1Q16706 1144 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 DDX23Q9BUQ8 820 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 ECT2Q9H8V3 914 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 TRIM33Q9UPN9 1127 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 PRPF3O43395 683 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 HIP1RO75146 1068 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 FGFR4P22455 802 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 VPS36Q86VN1 386 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 TMBIM4Q9HC24 238 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 PANK4Q9NVE7 773 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 POTEMA6NI47 508 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 CCT8L1PA6NM43 557 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms