RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 GPCPD1Q9NPB8 672 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 TNS1Q9HBL0 1735 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 MYMKA6NI61 221 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 MEA1Q16626 185 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CERS5Q8N5B7 392 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 TRAF5O00463 557 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 KCNA3P22001 575 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 GNA11P29992 359 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 APBA1Q02410 837 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 CALCRLQ16602 461 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 CCDC40Q4G0X9 1142 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 IQCEQ6IPM2 695 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 KRT25Q7Z3Z0 450 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 DUOX1Q9NRD9 1551 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 TDP2O95551 362 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 VWA3BQ502W6 1294 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 SPATA4Q8NEY3 305 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 SNX29Q8TEQ0 813 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 MTFR1LQ9H019 292 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 SNX12Q9UMY4 172 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 JRKLQ9Y4A0 524 aa16.03■□□□□ 0.16
SFSWAP-201ENST00000261674 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 ECE2O60344 883 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 CCT5P48643 541 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 LRRC47Q8N1G4 583 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 ALS2CR12Q96Q35 445 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 NUDT12Q9BQG2 462 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 CENPHQ9H3R5 247 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 PACSIN2Q9UNF0 486 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 USP17L5A8MUK1 530 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 RASA1P20936 1047 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 TMED8Q6PL24 325 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 CREG2Q8IUH2 290 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 RETREG2Q8NC44 543 aa16.02■□□□□ 0.16
SFSWAP-201ENST00000261674 ATP1A2P50993 1020 aa16.02■□□□□ 0.15
SFSWAP-201ENST00000261674 OSBPL9Q96SU4 736 aa16.02■□□□□ 0.15
SFSWAP-201ENST00000261674 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 CDK8P49336 464 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 LARP4BQ92615 738 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 MMTAG2Q9BU76 263 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 SALL4Q9UJQ4 1053 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 FLT1P17948 1338 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 M0R2N6 131 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 ZEB2O60315 1214 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 FTCDO95954 541 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 SLC1A4P43007 532 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 PIM2Q9P1W9 311 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 PLAGL2Q9UPG8 496 aa16.01■□□□□ 0.15
SFSWAP-201ENST00000261674 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
SFSWAP-201ENST00000261674 BTDP43251 543 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 GUCY2FP51841 1108 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 UBE2SQ16763 222 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 C8orf74Q6P047 294 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 DNAAF5Q86Y56 855 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 FAM184BQ9ULE4 1060 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 SAMM50Q9Y512 469 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 ZSCAN5CA6NGD5 496 aaPredicted RBP16■□□□□ 0.15
SFSWAP-201ENST00000261674 RGL2O15211 777 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 SLC37A4O43826 429 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 MYL1P05976 194 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 KRT79Q5XKE5 535 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 DDX12PQ92771 950 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 AK8Q96MA6 479 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 TSGA10Q9BZW7 698 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 ZMYND12Q9H0C1 365 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
SFSWAP-201ENST00000261674 AGPSO00116 658 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 POLR2FP61218 127 aaKnown RBP16■□□□□ 0.15
SFSWAP-201ENST00000261674 KCNK18Q7Z418 384 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 SH2D3CQ8N5H7 860 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
SFSWAP-201ENST00000261674 BCAS4Q8TDM0 211 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 SH2D4AQ9H788 454 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
SFSWAP-201ENST00000261674 ANO9A1A5B4 782 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 LAD1O00515 517 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 PRPF6O94906 941 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 GRB10Q13322 594 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 MTMR8Q96EF0 704 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms