RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 RNF26Q9BY78 433 aaPredicted RBP9.79□□□□□ -0.84
TMEM258-201ENST00000257262 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 RTEL1Q9NZ71 1219 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 PCDHA6Q9UN73 950 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 PCDHA8Q9Y5H6 950 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 FRMPD4Q14CM0 1322 aa9.79□□□□□ -0.84
TMEM258-201ENST00000257262 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 SPDYE3A6NKU9 549 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 H0YGN5 161 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 CPLX1O14810 134 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 NKRFO15226 690 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 PFKFB2O60825 505 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 DTNBO60941 627 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 PPP1R37O75864 691 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 CCND2P30279 289 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 ADCY7P51828 1080 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 AKAP17AQ02040 695 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 FSCN1Q16658 493 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 C7orf61Q8IZ16 206 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 OR6J1Q8NGC5 347 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 KIF2CQ99661 725 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 RIC8AQ9NPQ8 531 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 TMEM260Q9NX78 707 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
TMEM258-201ENST00000257262 NR2E3Q9Y5X4 410 aa9.78□□□□□ -0.84
TMEM258-201ENST00000257262 MKI67P46013 3256 aaKnown RBP9.77□□□□□ -0.85
TMEM258-201ENST00000257262 ADAMTS3O15072 1205 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 LARGE1O95461 756 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.85
TMEM258-201ENST00000257262 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
TMEM258-201ENST00000257262 RTP1P59025 263 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 SP2Q02086 613 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 ME3Q16798 604 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 PCNX4Q63HM2 1172 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 KCNV1Q6PIU1 500 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 CPLX2Q6PUV4 134 aaKnown RBP9.77□□□□□ -0.85
TMEM258-201ENST00000257262 CXCL17Q6UXB2 119 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 TRIM22Q8IYM9 498 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 PGBD1Q96JS3 809 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 GLT1D1Q96MS3 346 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 ZMYND12Q9H0C1 365 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 ATP11BQ9Y2G3 1177 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 MRVI1Q9Y6F6 885 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 ELP1O95163 1332 aa9.77□□□□□ -0.85
TMEM258-201ENST00000257262 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 A6NJR5 290 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 ZEB2O60315 1214 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 SORBS3O60504 671 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 STAM2O75886 525 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 DEXIO95424 95 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 CTDNEP1O95476 244 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 FOSP01100 380 aaPredicted RBP9.76□□□□□ -0.85
TMEM258-201ENST00000257262 GH1P01241 217 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 MYL3P08590 195 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 SYN1P17600 705 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 CPT1AP50416 773 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 ARHGAP1Q07960 439 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 SNX17Q15036 470 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 TRIM60Q495X7 471 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 C1orf53Q5VUE5 145 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 JAKMIP3Q5VZ66 844 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 XRRA1Q6P2D8 792 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
TMEM258-201ENST00000257262 CCDC12Q8WUD4 166 aaPredicted RBP9.76□□□□□ -0.85
TMEM258-201ENST00000257262 INPP4AQ96PE3 977 aaPredicted RBP9.76□□□□□ -0.85
TMEM258-201ENST00000257262 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 BCAS3Q9H6U6 928 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 C6orf50Q9HD87 102 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 VPS54Q9P1Q0 977 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 ZMYND8Q9ULU4 1186 aaPredicted RBP9.76□□□□□ -0.85
TMEM258-201ENST00000257262 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
TMEM258-201ENST00000257262 ESYT2A0FGR8 921 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 CABYRO75952 493 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 CDKL5O76039 1030 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 GGPS1O95749 300 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 MMP3P08254 477 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 TGFB3P10600 412 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 ITGB5P18084 799 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 GNA11P29992 359 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 ICAM3P32942 547 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 CDK7P50613 346 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 NLRP5P59047 1200 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 PSMC6P62333 389 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 PURAQ00577 322 aaKnown RBP9.75□□□□□ -0.85
TMEM258-201ENST00000257262 TLE2Q04725 743 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 SEMA3FQ13275 785 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 LAMC2Q13753 1193 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 GNPTABQ3T906 1256 aa9.75□□□□□ -0.85
TMEM258-201ENST00000257262 BRDTQ58F21 947 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms