RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CD209Q9NNX6 404 aa18.46■□□□□ 0.55
SORT1-201ENST00000256637 RIMS1Q86UR5 1692 aaKnown RBP18.46■□□□□ 0.55
SORT1-201ENST00000256637 RINT1Q6NUQ1 792 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 SECISBP2LQ93073 1101 aaKnown RBP18.45■□□□□ 0.54
SORT1-201ENST00000256637 RPN1P04843 607 aaKnown RBP18.45■□□□□ 0.54
SORT1-201ENST00000256637 IWS1Q96ST2 819 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 RBSNQ9H1K0 784 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 USP6P35125 1406 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 GKAP1Q5VSY0 366 aaPredicted RBP18.45■□□□□ 0.54
SORT1-201ENST00000256637 SWSAP1Q6NVH7 229 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 ZWILCHQ9H900 591 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 COL4A3BPQ9Y5P4 624 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 PASD1Q8IV76 773 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 GDAP1L1Q96MZ0 367 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 CEP85LQ5SZL2 805 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 NOSTRINQ8IVI9 506 aa18.45■□□□□ 0.54
SORT1-201ENST00000256637 SHROOM2Q13796 1616 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 SOX5P35711 763 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 GMPSP49915 693 aaPredicted RBP18.44■□□□□ 0.54
SORT1-201ENST00000256637 MESDQ14696 234 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
SORT1-201ENST00000256637 ANKRD42Q8N9B4 389 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 SLC4A7Q9Y6M7 1214 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 ACTN1P12814 892 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
SORT1-201ENST00000256637 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 SCRN1Q12765 414 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 TTLL4Q14679 1199 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 CCL15Q16663 113 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 NKIRAS1Q9NYS0 192 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 PRR23AA6NEV1 266 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 ACCSQ96QU6 501 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 RSPH14Q9UHP6 348 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 ADCY8P40145 1251 aa18.44■□□□□ 0.54
SORT1-201ENST00000256637 AFAP1L2Q8N4X5 818 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 UBE2TQ9NPD8 197 aaPredicted RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 C8orf74Q6P047 294 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 ATP6V1E2Q96A05 226 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 NSUN2Q08J23 767 aaKnown RBP eCLIP18.43■□□□□ 0.54
SORT1-201ENST00000256637 BRD3Q15059 726 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 TMEM260Q9NX78 707 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 CYP27B1O15528 508 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 DYNC1LI2O43237 492 aaPredicted RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 N4BP1O75113 896 aaKnown RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 PLEKHA8P1O95397 391 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 PPP4R1Q8TF05 950 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 RNF146Q9NTX7 359 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 KCNK3O14649 394 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 WDR46O15213 610 aaKnown RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 GUCY2FP51841 1108 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 PPP2R3AQ06190 1150 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 ANKS4BQ8N8V4 417 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 KCTD6Q8NC69 237 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 PCDHA6Q9UN73 950 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 PCDHA8Q9Y5H6 950 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 HMBSP08397 361 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 MAGEA1P43355 309 aa18.43■□□□□ 0.54
SORT1-201ENST00000256637 SDCCAG8Q86SQ7 713 aaPredicted RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 LARSQ9P2J5 1176 aaKnown RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 ARMCX3Q9UH62 379 aaPredicted RBP18.43■□□□□ 0.54
SORT1-201ENST00000256637 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 NFE2L3Q9Y4A8 694 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 ABCC4O15439 1325 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 NME3Q13232 169 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 ZNF449Q6P9G9 518 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 ZNF302Q9NR11 478 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 NAP1L3Q99457 506 aaPredicted RBP18.42■□□□□ 0.54
SORT1-201ENST00000256637 MYL1P05976 194 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 FAM184BQ9ULE4 1060 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 RNF8O76064 485 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 MOCS2O96007 188 aaPredicted RBP18.42■□□□□ 0.54
SORT1-201ENST00000256637 CFAP36Q96G28 342 aa18.42■□□□□ 0.54
SORT1-201ENST00000256637 K7ERI5 159 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 OPA1O60313 960 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 SH2D4BQ5SQS7 431 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 WDR48Q8TAF3 677 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 PFKFB1P16118 471 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 BHMTQ93088 406 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 TTC25Q96NG3 672 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 FEM1BQ9UK73 627 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 USP17L6PQ6QN14 398 aa18.41■□□□□ 0.54
SORT1-201ENST00000256637 SAMD15Q9P1V8 674 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms