RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 E7ENQ6 273 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 INHBCP55103 352 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 NCAPHQ15003 741 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 CFAP61Q8NHU2 1237 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
CCNA1-201ENST00000255465 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
CCNA1-201ENST00000255465 SEMA3EO15041 775 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 IFIT2P09913 472 aaKnown RBP13.02□□□□□ -0.32
CCNA1-201ENST00000255465 TRPC1P48995 793 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 FSTL1Q12841 308 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 CLPPQ16740 277 aaPredicted RBP13.02□□□□□ -0.32
CCNA1-201ENST00000255465 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 CD302Q8IX05 232 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 LRRC43Q8N309 656 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.32
CCNA1-201ENST00000255465 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 MYOZ2Q9NPC6 264 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 DENND2AQ9ULE3 1009 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 TMED5Q9Y3A6 229 aa13.02□□□□□ -0.32
CCNA1-201ENST00000255465 CTDP1Q9Y5B0 961 aaPredicted RBP13.02□□□□□ -0.32
CCNA1-201ENST00000255465 A0A1W2PQ27 194 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 A0A1W2PQ64 194 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 A0A1W2PQD8 194 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
CCNA1-201ENST00000255465 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
CCNA1-201ENST00000255465 RESTQ13127 1097 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 RASGRF1Q13972 1273 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 PKN1Q16512 942 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 ZBTB8BQ8NAP8 495 aaPredicted RBP13.02□□□□□ -0.33
CCNA1-201ENST00000255465 WDR66Q8TBY9 1149 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 RSPH1Q8WYR4 309 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 EHD4Q9H223 541 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 VCXQ9H320 206 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.33
CCNA1-201ENST00000255465 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.33
CCNA1-201ENST00000255465 HDAC9Q9UKV0 1011 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 FRMD4BQ9Y2L6 1034 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 C2CD2Q9Y426 696 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.33
CCNA1-201ENST00000255465 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 HSF2BPO75031 334 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
CCNA1-201ENST00000255465 BAG3O95817 575 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 TNFRSF8P28908 595 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
CCNA1-201ENST00000255465 AMPD2Q01433 879 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 PDCLQ13371 301 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 GRIK5Q16478 980 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 MAP1SQ66K74 1059 aaPredicted RBP13.01□□□□□ -0.33
CCNA1-201ENST00000255465 EMBQ6PCB8 327 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 AACSQ86V21 672 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
CCNA1-201ENST00000255465 ZC3H15Q8WU90 426 aaKnown RBP13.01□□□□□ -0.33
CCNA1-201ENST00000255465 CYFIP2Q96F07 1278 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 PGAP2Q9UHJ9 254 aa13.01□□□□□ -0.33
CCNA1-201ENST00000255465 DNM1LO00429 736 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 FLOT1O75955 427 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 WFS1O76024 890 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 KIF4AO95239 1232 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
CCNA1-201ENST00000255465 MDH1P40925 334 aaKnown RBP13□□□□□ -0.33
CCNA1-201ENST00000255465 ITIH3Q06033 890 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 SYNE3Q6ZMZ3 975 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 CXorf38Q8TB03 319 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 CCDC28BQ9BUN5 200 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 NDST4Q9H3R1 872 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 TUBGCP4Q9UGJ1 667 aa13□□□□□ -0.33
CCNA1-201ENST00000255465 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
CCNA1-201ENST00000255465 A0A1B0GVL5 298 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 UQCRFS1P1P0C7P4 283 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 SCNN1BP51168 640 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 MYL5Q02045 173 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 Q6ZUG5 572 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
CCNA1-201ENST00000255465 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms