RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
CNN1-201ENST00000252456 LAMA3Q16787 3333 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 FOSP01100 380 aaPredicted RBP16.3■□□□□ 0.2
CNN1-201ENST00000252456 MMP3P08254 477 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 SYN1P17600 705 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 SREBF1P36956 1147 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 NPY5RQ15761 445 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 GNPTABQ3T906 1256 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
CNN1-201ENST00000252456 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 SH3GLB2Q9NR46 395 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 UBIAD1Q9Y5Z9 338 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
CNN1-201ENST00000252456 FIBPO43427 364 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 CABYRO75952 493 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 GGPS1O95749 300 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
CNN1-201ENST00000252456 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
CNN1-201ENST00000252456 PSMC6P62333 389 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 CELF3Q5SZQ8 465 aaKnown RBP16.29■□□□□ 0.2
CNN1-201ENST00000252456 JAKMIP3Q5VZ66 844 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 REXO1Q8N1G1 1221 aaKnown RBP16.29■□□□□ 0.2
CNN1-201ENST00000252456 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
CNN1-201ENST00000252456 ARVCFO00192 962 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 ZEB2O60315 1214 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 SORBS3O60504 671 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 CDKL5O76039 1030 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 MYL3P08590 195 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 SH3RF1Q7Z6J0 888 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
CNN1-201ENST00000252456 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 GPRASP2Q96D09 838 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 PRO3102Q9H379 93 aa16.28■□□□□ 0.2
CNN1-201ENST00000252456 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
CNN1-201ENST00000252456 PQBP1O60828 265 aaKnown RBP16.27■□□□□ 0.2
CNN1-201ENST00000252456 GNA11P29992 359 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 ITGA7Q13683 1181 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 FAM126BQ8IXS8 530 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 DHX37Q8IY37 1157 aaKnown RBP16.27■□□□□ 0.2
CNN1-201ENST00000252456 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.2
CNN1-201ENST00000252456 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
CNN1-201ENST00000252456 LAMA2P24043 3122 aaKnown RBP16.27■□□□□ 0.2
CNN1-201ENST00000252456 TRIOBPQ9H2D6 2365 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 M0R2N6 131 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 EDIL3O43854 480 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 ATP9AO75110 1047 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 KCNA2P16389 499 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 ARHGAP4P98171 946 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.19
CNN1-201ENST00000252456 KAT2BQ92831 832 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 JADE2Q9NQC1 790 aa16.27■□□□□ 0.19
CNN1-201ENST00000252456 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 JAK2O60674 1132 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 KPNA6O60684 536 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 ITGB8P26012 769 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 MTMR1Q13613 665 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 RABEP1Q15276 862 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 METTL7BQ6UX53 244 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
CNN1-201ENST00000252456 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
CNN1-201ENST00000252456 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 GDF15Q99988 308 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 MXRA8Q9BRK3 442 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
CNN1-201ENST00000252456 ORC3Q9UBD5 711 aaPredicted RBP16.26■□□□□ 0.19
CNN1-201ENST00000252456 PCDHA4Q9UN74 947 aa16.26■□□□□ 0.19
CNN1-201ENST00000252456 FAM86B1E9PN63 330 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
CNN1-201ENST00000252456 CD4P01730 458 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 CYP3A4P08684 503 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 CLTBP09497 229 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 FAM86B2P0C5J1 330 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 NLRP5P59047 1200 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 NEDD9Q14511 834 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 DGKDQ16760 1214 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 CEP55Q53EZ4 464 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 MCTP2Q6DN12 878 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 CYFIP1Q7L576 1253 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 PHF20Q9BVI0 1012 aa16.25■□□□□ 0.19
CNN1-201ENST00000252456 KCNH7Q9NS40 1196 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms