RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 SNX16P57768 344 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 BPIFB3P59826 476 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
PMPCB-201ENST00000249269 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 KBTBD12Q3ZCT8 623 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 IRGCQ6NXR0 463 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 PACS2Q86VP3 889 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 PNKPQ96T60 521 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 NELL2Q99435 816 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 MMADHCQ9H3L0 296 aaPredicted RBP16.56■□□□□ 0.24
PMPCB-201ENST00000249269 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 PPP1R3GB7ZBB8 358 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 FOXN1O15353 648 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 CSPG5O95196 566 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 GYPCP04921 128 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
PMPCB-201ENST00000249269 KRT83P78385 493 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 SCARF1Q14162 830 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 TRAPPC11Q7Z392 1133 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 LRRC49Q8IUZ0 686 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 NOC3LQ8WTT2 800 aaKnown RBP16.56■□□□□ 0.24
PMPCB-201ENST00000249269 USP6NLQ92738 828 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 NAPBQ9H115 298 aa16.56■□□□□ 0.24
PMPCB-201ENST00000249269 ZNHIT6Q9NWK9 470 aaKnown RBP16.56■□□□□ 0.24
PMPCB-201ENST00000249269 CALM1P0DP23 149 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 CALM2P0DP24 149 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 CALM3P0DP25 149 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 USP14P54578 494 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 CORO7P57737 925 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 MAP3K12Q12852 859 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 RCN1Q15293 331 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 PAPD7Q5XG87 772 aaKnown RBP16.55■□□□□ 0.24
PMPCB-201ENST00000249269 FAM114A1Q8IWE2 563 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 IFNL3Q8IZI9 196 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 VPS52Q8N1B4 723 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 SPAG5Q96R06 1193 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 CSRNP2Q9H175 543 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 EPC1Q9H2F5 836 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 ZNF532Q9HCE3 1301 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 EPB41L4AQ9HCS5 686 aaPredicted RBP16.55■□□□□ 0.24
PMPCB-201ENST00000249269 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 SPO11Q9Y5K1 396 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 H7C1D1 291 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 TBX3O15119 743 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
PMPCB-201ENST00000249269 CASP14P31944 242 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 ARHGAP25P42331 645 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 GBP6Q6ZN66 633 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 TMEM151BQ8IW70 566 aa16.55■□□□□ 0.24
PMPCB-201ENST00000249269 TBKBP1A7MCY6 615 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 TEX33O43247 280 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 ZNF189O75820 626 aaPredicted RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 CCNCP24863 283 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 RASA2Q15283 850 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 SPATS2Q86XZ4 545 aaKnown RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 ZNF713Q8N859 430 aaPredicted RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 C3orf20Q8ND61 904 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 OSBPL10Q9BXB5 764 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 BTF3P20290 206 aaKnown RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 KRT2P35908 639 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 PPP1R2P41236 205 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 HSD17B7P56937 341 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 VSNL1P62760 191 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 MTF1Q14872 753 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 Q3C1V9 767 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 ODR4Q5SWX8 454 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 PDXDC2PQ6P474 469 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 IPCEF1Q8WWN9 437 aaPredicted RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 MKL2Q9ULH7 1088 aa16.54■□□□□ 0.24
PMPCB-201ENST00000249269 MRPL42Q9Y6G3 142 aaKnown RBP16.54■□□□□ 0.24
PMPCB-201ENST00000249269 FOXD2O60548 495 aaPredicted RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 PDE8BO95263 885 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 PSMA3P25788 255 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 GNALP38405 381 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 CCNHP51946 323 aaPredicted RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 WDR75Q8IWA0 830 aaKnown RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 TRMT44Q8IYL2 757 aaKnown RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 AFAP1L1Q8TED9 768 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 LPIN2Q92539 896 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 EEF1GP26641 437 aaKnown RBP16.53■□□□□ 0.24
PMPCB-201ENST00000249269 CLCN2P51788 898 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 SNX1Q13596 522 aa16.53■□□□□ 0.24
PMPCB-201ENST00000249269 CLPPQ16740 277 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms