RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
PTPN12-201ENST00000248594 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 KDM4CQ9H3R0 1056 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 ZNF532Q9HCE3 1301 aa20.05■□□□□ 0.8
PTPN12-201ENST00000248594 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 SRGNP10124 158 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 HSPA2P54652 639 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 NLRP5P59047 1200 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 ZC3H12AQ5D1E8 599 aaKnown RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 ITFG2Q969R8 447 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 DDX23Q9BUQ8 820 aaKnown RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 SWAP70Q9UH65 585 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 RASSF10A6NK89 507 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 ORC4O43929 436 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 HIP1RO75146 1068 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 CLSTN1O94985 981 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 MKRN4PQ13434 485 aaPredicted RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 MIGA1Q8NAN2 632 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 C2CD2Q9Y426 696 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 KIAA0753Q2KHM9 967 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 TRIM74Q86UV6 250 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 TRIM73Q86UV7 250 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 EZH1Q92800 747 aaPredicted RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 NAF1Q96HR8 494 aaKnown RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 DLGAP2Q9P1A6 1054 aa20.04■□□□□ 0.8
PTPN12-201ENST00000248594 CORO1CQ9ULV4 474 aaPredicted RBP20.04■□□□□ 0.8
PTPN12-201ENST00000248594 GOLGA6L10A0A0M3HER8 536 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 UBA7P41226 1012 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 ERFP50548 548 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 ZNF507Q8TCN5 953 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 PACSIN1Q9BY11 444 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 SLC5A4Q9NY91 659 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 PCDHGC5Q9Y5F6 944 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
PTPN12-201ENST00000248594 ZFYP08048 801 aaPredicted RBP20.03■□□□□ 0.8
PTPN12-201ENST00000248594 FCER1AP12319 257 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 MEA1Q16626 185 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 PPP1R15BQ5SWA1 713 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 ANKRD40Q6AI12 368 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
PTPN12-201ENST00000248594 SMIM22K7EJ46 135 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 KLRC1P26715 233 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 CNGA1P29973 690 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 SCNN1BP51168 640 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 RAD23BP54727 409 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 RNF220Q5VTB9 566 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 TMEM154Q6P9G4 183 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 NDST4Q9H3R1 872 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 UTYO14607 1347 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 MBD4O95243 580 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 EEF1GP26641 437 aaKnown RBP20.02■□□□□ 0.8
PTPN12-201ENST00000248594 CCDC25Q86WR0 208 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 ADSSL1Q8N142 457 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 TRIM51Q9BSJ1 452 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 AZI2Q9H6S1 392 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 PLCB1Q9NQ66 1216 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 RGPD8O14715 1765 aaPredicted RBP20.02■□□□□ 0.8
PTPN12-201ENST00000248594 ITSN1Q15811 1721 aa20.02■□□□□ 0.8
PTPN12-201ENST00000248594 KRIT1O00522 736 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 RAPGEF1Q13905 1077 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 LACTB2Q53H82 288 aaPredicted RBP20.02■□□□□ 0.79
PTPN12-201ENST00000248594 METTL24Q5JXM2 366 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 DAAM2Q86T65 1068 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 ELOA2Q8IYF1 753 aaPredicted RBP20.02■□□□□ 0.79
PTPN12-201ENST00000248594 ZNF654Q8IZM8 581 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 GDAP1Q8TB36 358 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 TBC1D5Q92609 795 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 EPAS1Q99814 870 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 KCNK9Q9NPC2 374 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 ADAMTS1Q9UHI8 967 aa20.02■□□□□ 0.79
PTPN12-201ENST00000248594 ZMYND8Q9ULU4 1186 aaPredicted RBP20.02■□□□□ 0.79
PTPN12-201ENST00000248594 PDS5AQ29RF7 1337 aaKnown RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 A0A1W2PQC6 194 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 ITGA4P13612 1032 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 ITGA6P23229 1130 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 RFC5P40937 340 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 IFI35P80217 286 aaPredicted RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 FERMT2Q96AC1 680 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 GGA2Q9UJY4 613 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 TTI1O43156 1089 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 SART1O43290 800 aaKnown RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 HSPA9P38646 679 aaKnown RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 BLMHQ13867 455 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 RPS6KA1Q15418 735 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 LMNTD2Q8IXW0 634 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 PAIP2Q9BPZ3 127 aaKnown RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 FGFR1OP2Q9NVK5 253 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 L3MBTL3Q96JM7 780 aaPredicted RBP20.01■□□□□ 0.79
PTPN12-201ENST00000248594 RPS6KC1Q96S38 1066 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 HOMER3Q9NSC5 361 aa20.01■□□□□ 0.79
PTPN12-201ENST00000248594 STXBP3O00186 592 aa20■□□□□ 0.79
PTPN12-201ENST00000248594 BIRC3Q13489 604 aa20■□□□□ 0.79
PTPN12-201ENST00000248594 LLGL1Q15334 1064 aa20■□□□□ 0.79
PTPN12-201ENST00000248594 LRRC23Q53EV4 343 aaPredicted RBP20■□□□□ 0.79
PTPN12-201ENST00000248594 CWF19L1Q69YN2 538 aaKnown RBP20■□□□□ 0.79
PTPN12-201ENST00000248594 FBF1Q8TES7 1133 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms