RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MTA3Q9BTC8 594 aa18.58■□□□□ 0.57
SGPP1-201ENST00000247225 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.57
SGPP1-201ENST00000247225 KIAA1024Q9UPX6 916 aa18.58■□□□□ 0.57
SGPP1-201ENST00000247225 NR1D1P20393 614 aa18.58■□□□□ 0.56
SGPP1-201ENST00000247225 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
SGPP1-201ENST00000247225 TEX11Q8IYF3 940 aa18.58■□□□□ 0.56
SGPP1-201ENST00000247225 CASKIN2Q8WXE0 1202 aa18.58■□□□□ 0.56
SGPP1-201ENST00000247225 MMTAG2Q9BU76 263 aaKnown RBP18.58■□□□□ 0.56
SGPP1-201ENST00000247225 ZNF804BA4D1E1 1349 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 RAD51CO43502 376 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 STAT3P40763 770 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 GRB10Q13322 594 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 C12orf60Q5U649 245 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 CEP95Q96GE4 821 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 SCLT1Q96NL6 688 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 SETDB2Q96T68 719 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 CD248Q9HCU0 757 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
SGPP1-201ENST00000247225 MYH13Q9UKX3 1938 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
SGPP1-201ENST00000247225 GOLGA6L7A0A1B0GV03 622 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 ZNF233A6NK53 670 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 ABCB4P21439 1286 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 SLC30A10Q6XR72 485 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 MMS22LQ6ZRQ5 1243 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 KRT25Q7Z3Z0 450 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 MYOCDQ8IZQ8 938 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 MMGT1Q8N4V1 131 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 PANK4Q9NVE7 773 aa18.57■□□□□ 0.56
SGPP1-201ENST00000247225 TJP1Q07157 1748 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 SFI1A8K8P3 1242 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 IFFO1Q0D2I5 559 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 IKQ13123 557 aaPredicted RBP18.56■□□□□ 0.56
SGPP1-201ENST00000247225 PAK2Q13177 524 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 ERGIC2Q96RQ1 377 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 COL1A1P02452 1464 aaPredicted RBP18.56■□□□□ 0.56
SGPP1-201ENST00000247225 RPS6KA5O75582 802 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 LSP1P33241 339 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 CTNNA1P35221 906 aaKnown RBP18.56■□□□□ 0.56
SGPP1-201ENST00000247225 GRM4Q14833 912 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 BAG3O95817 575 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 RPS6KA1Q15418 735 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 PDXDC1Q6P996 788 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 CCDC114Q96M63 670 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 CELF4Q9BZC1 486 aaKnown RBP18.56■□□□□ 0.56
SGPP1-201ENST00000247225 BLOC1S4Q9NUP1 217 aa18.56■□□□□ 0.56
SGPP1-201ENST00000247225 CYP4A11Q02928 519 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 ADAM9Q13443 819 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 PLS1Q14651 629 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 TTBK2Q6IQ55 1244 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 GJB7Q6PEY0 223 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 KCTD1Q719H9 257 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 DGKHQ86XP1 1220 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 CHORDC1Q9UHD1 332 aaPredicted RBP18.55■□□□□ 0.56
SGPP1-201ENST00000247225 CLIC2O15247 247 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 TAL1P17542 331 aaPredicted RBP18.55■□□□□ 0.56
SGPP1-201ENST00000247225 CDK8P49336 464 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 ECM1Q16610 540 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 FAM26FQ5R3K3 315 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 TAX1BP1Q86VP1 789 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 AMACRQ9UHK6 382 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 FLT1P17948 1338 aa18.55■□□□□ 0.56
SGPP1-201ENST00000247225 TMEM110-MUSTN1A8MSY1 372 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
SGPP1-201ENST00000247225 SLC9A1P19634 815 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 BTDP43251 543 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 KCNMA1Q12791 1236 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
SGPP1-201ENST00000247225 NFIXQ14938 502 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 E2F5Q15329 346 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 ASIC2Q16515 512 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 EMBQ6PCB8 327 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 C7orf25Q9BPX7 421 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 IKZF4Q9H2S9 585 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 NOVA2Q9UNW9 492 aaKnown RBP18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L15C9J2P7 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L13C9JLJ4 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L11C9JVI0 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L18D6R9N7 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L22D6RA61 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L17D6RBQ6 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L19D6RCP7 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L20D6RJB6 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 RIMBP2O15034 1052 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 RDXP35241 583 aaKnown RBP18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L24Q0WX57 530 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 USP17L6PQ6QN14 398 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 CCT8L2Q96SF2 557 aa18.54■□□□□ 0.56
SGPP1-201ENST00000247225 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 POTECB2RU33 542 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 TLR2O60603 784 aa18.53■□□□□ 0.56
SGPP1-201ENST00000247225 RASA1P20936 1047 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms