RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
SOX9-201ENST00000245479 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
SOX9-201ENST00000245479 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
SOX9-201ENST00000245479 MYO1FO00160 1098 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 CYTH3O43739 400 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 HEXIM1O94992 359 aaKnown RBP12.67□□□□□ -0.38
SOX9-201ENST00000245479 ADCY7P51828 1080 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 HSD3B7Q9H2F3 369 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PCDHA12Q9UN75 941 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 ESYT3A0FGR9 886 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 MOCS3O95396 460 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 KRT13P13646 458 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 ELF1P32519 619 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 DNM2P50570 870 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
SOX9-201ENST00000245479 ATP11AP98196 1134 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 IL17AQ16552 155 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 NFIAQ12857 509 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 ANKRD40Q6AI12 368 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 KLC4Q9NSK0 619 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
SOX9-201ENST00000245479 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 MEFVO15553 781 aaPredicted RBP12.66□□□□□ -0.38
SOX9-201ENST00000245479 RAD17O75943 681 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 TRIM68Q6AZZ1 485 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 CCDC25Q86WR0 208 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 KCNK9Q9NPC2 374 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
SOX9-201ENST00000245479 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 DDAH1O94760 285 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 FTCDO95954 541 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 ABCB4P21439 1286 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
SOX9-201ENST00000245479 BIRC2Q13490 618 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 ALS2CLQ60I27 953 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 SH2D3CQ8N5H7 860 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 VIPAS39Q9H9C1 493 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 H7C1D1 291 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 ELMO3Q96BJ8 720 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 RAB34Q9BZG1 259 aa12.66□□□□□ -0.38
SOX9-201ENST00000245479 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.386e-11■□□□□ 9.6
SOX9-201ENST00000245479 APBA3O96018 575 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 NR1I3Q14994 352 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 RBBP5Q15291 538 aaKnown RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 UHMK1Q8TAS1 419 aaKnown RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 KRT12Q99456 494 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 BCL9O00512 1426 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 ERVK-24P63145 666 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 PRR5LQ6MZQ0 368 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 ACTR5Q9H9F9 607 aaPredicted RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 CHORDC1Q9UHD1 332 aaPredicted RBP12.65□□□□□ -0.38
SOX9-201ENST00000245479 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
SOX9-201ENST00000245479 POTEB3A0JP26 581 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 POTECB2RU33 542 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 PDE6BP35913 854 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 ARHGAP44Q17R89 818 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.39
SOX9-201ENST00000245479 POTEBQ6S5H4 581 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.39
SOX9-201ENST00000245479 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.39
SOX9-201ENST00000245479 RASA1P20936 1047 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 CHRNA5P30532 468 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
SOX9-201ENST00000245479 GRAPQ13588 217 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms