RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TAF1DQ9H5J8 278 aaPredicted RBP10.15□□□□□ -0.78
SRSF6-201ENST00000244020 GDF3Q9NR23 364 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 CETN3O15182 167 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 EPHB6O15197 1021 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 RAD51CO43502 376 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 POLR2FP61218 127 aaKnown RBP10.15□□□□□ -0.78
SRSF6-201ENST00000244020 ZBTB16Q05516 673 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 ITGB3BPQ13352 177 aaPredicted RBP10.15□□□□□ -0.78
SRSF6-201ENST00000244020 NAALADL2Q58DX5 795 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 FIGNQ5HY92 759 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 KIRREL3Q8IZU9 778 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 TNFRSF25Q93038 417 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 SEC16BQ96JE7 1060 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 NAP1L3Q99457 506 aaPredicted RBP10.15□□□□□ -0.78
SRSF6-201ENST00000244020 AP1M1Q9BXS5 423 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 TRIM31Q9BZY9 425 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 RIC1Q4ADV7 1423 aa10.15□□□□□ -0.78
SRSF6-201ENST00000244020 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.79
SRSF6-201ENST00000244020 TRAF5O00463 557 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 GCFC2P16383 781 aaKnown RBP10.15□□□□□ -0.79
SRSF6-201ENST00000244020 ATF3P18847 181 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 CDC37Q16543 378 aaPredicted RBP10.15□□□□□ -0.79
SRSF6-201ENST00000244020 FUKQ8N0W3 1084 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 VGLL2Q8N8G2 317 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 TCP11Q8WWU5 503 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.79
SRSF6-201ENST00000244020 TRIM9Q9C026 710 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.79
SRSF6-201ENST00000244020 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.79
SRSF6-201ENST00000244020 CNTNAP5Q8WYK1 1306 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 PHF20L1A8MW92 1017 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 KLRC4O43908 158 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 TNFRSF8P28908 595 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 KLHL30Q0D2K2 578 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 FUT2Q10981 343 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MIIPQ5JXC2 388 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 DDX42Q86XP3 938 aaKnown RBP eCLIP10.14□□□□□ -0.792e-10■■■■■ 33.6
SRSF6-201ENST00000244020 PPFIBP2Q8ND30 876 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MIEF2Q96C03 454 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 HVCN1Q96D96 273 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 KBTBD4Q9NVX7 518 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 SAMD15Q9P1V8 674 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MCM8Q9UJA3 840 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MARF1Q9Y4F3 1742 aaKnown RBP10.14□□□□□ -0.79
SRSF6-201ENST00000244020 NID2Q14112 1375 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 HSD17B3P37058 310 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 TXKP42681 527 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 EVA1CP58658 441 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MAGOHP61326 146 aaKnown RBP10.14□□□□□ -0.79
SRSF6-201ENST00000244020 PPP2R2AP63151 447 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 ABTB1Q969K4 478 aaPredicted RBP10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MAGOHBQ96A72 148 aaKnown RBP10.14□□□□□ -0.79
SRSF6-201ENST00000244020 TMBIM4Q9HC24 238 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 MYH10P35580 1976 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 TMEM94Q12767 1356 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 RASIP1Q5U651 963 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 RASSF9O75901 435 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 RANBP1P43487 201 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 POLE2P56282 527 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 ZNF572Q7Z3I7 529 aaPredicted RBP10.14□□□□□ -0.79
SRSF6-201ENST00000244020 CUEDC2Q9H467 287 aa10.14□□□□□ -0.79
SRSF6-201ENST00000244020 KRIT1O00522 736 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 CTNND1O60716 968 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 BIRC3Q13489 604 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 MTMR3Q13615 1198 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 LRRC41Q15345 812 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 NPY5RQ15761 445 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 LSM14BQ9BX40 385 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 TRIM4Q9C037 500 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 CCSER1Q9C0I3 900 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 NSRP1Q9H0G5 558 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 DPH5Q9H2P9 285 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 OR52Z1P0C646 297 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 PAX7P23759 505 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 KLRC1P26715 233 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 SCTRP47872 440 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 ATP11AP98196 1134 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 KCTD19Q17RG1 926 aaPredicted RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 TEX11Q8IYF3 940 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 RAB3IL1Q8TBN0 382 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 SPAG5Q96R06 1193 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 VAT1LQ9HCJ6 419 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 FBXL5Q9UKA1 691 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 STX8Q9UNK0 236 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 A0A1W2PRG0 241 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 GRID2IPA4D2P6 1211 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 ADAMTS3O15072 1205 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 SERPING1P05155 500 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 NAPAP54920 295 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 CUL1Q13616 776 aa10.13□□□□□ -0.79
SRSF6-201ENST00000244020 IFI16Q16666 785 aaKnown RBP10.13□□□□□ -0.79
SRSF6-201ENST00000244020 ANKRD20A8PQ5CZ79 823 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms