RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TUBGCP2Q9BSJ2 902 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 NLRC4Q9NPP4 1024 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 IVNS1ABPQ9Y6Y0 642 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 A0A1B0GUA9 196 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 SNCBQ16143 134 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 TRIM58Q8NG06 486 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 STIM2Q9P246 746 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 SRGNP10124 158 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCND1-201ENST00000227507 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 RASSF7Q02833 373 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 EIF4E1BA6NMX2 242 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 ELF1P32519 619 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 LSP1P33241 339 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 TGFB2P61812 414 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 SLFN13Q68D06 897 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 KCNV1Q6PIU1 500 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 TACO1Q9BSH4 297 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 SLIT2O94813 1529 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 AGPSO00116 658 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 CLTAP09496 248 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 CACNB3P54284 484 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 PSMD14O00487 310 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 PLEKP08567 350 aaPredicted RBP12.65□□□□□ -0.38
CCND1-201ENST00000227507 NT5C2P49902 561 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 HERVK_113P62684 666 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 AMPD2Q01433 879 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
CCND1-201ENST00000227507 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 FTCDO95954 541 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 PAK2Q13177 524 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCND1-201ENST00000227507 TCP11Q8WWU5 503 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 HYOU1Q9Y4L1 999 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 DDAH1O94760 285 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 CARSP49589 748 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 PDE4DQ08499 809 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 RWDD2AQ9UIY3 292 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 BUB1BO60566 1050 aaPredicted RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 GCKP35557 465 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 TTLL1O95922 423 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 PDHBP11177 359 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 DNM2P50570 870 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 LETM2Q2VYF4 491 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 CFAP221Q4G0U5 840 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 OR2W6PQ8NHA6 318 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
CCND1-201ENST00000227507 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
CCND1-201ENST00000227507 PEAK1Q9H792 1746 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 GDF11O95390 407 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 ADCY7P51828 1080 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 EHHADHQ08426 723 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 NTRK3Q16288 839 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 USH1GQ495M9 461 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 ARMC9Q7Z3E5 817 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 CCDC189A1A4V9 331 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 EIF4A3P38919 411 aaKnown RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 DDR1Q08345 913 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 HIBCHQ6NVY1 386 aaPredicted RBP12.63□□□□□ -0.39
CCND1-201ENST00000227507 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 ARFGAP2Q8N6H7 521 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 OSBPL9Q96SU4 736 aa12.63□□□□□ -0.39
CCND1-201ENST00000227507 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms