RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 EGFLAMQ63HQ2 1017 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 RUFY2Q8WXA3 655 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 APBA2Q99767 749 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 RNF208Q9H0X6 261 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 RNF41Q9H4P4 317 aaPredicted RBP6.67□□□□□ -1.34
AFP-201ENST00000226359 NYAP2Q9P242 653 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 SYNPO2Q9UMS6 1093 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 TMX2Q9Y320 296 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 FOCADQ5VW36 1801 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 CCDC171Q6TFL3 1326 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 SALL3Q9BXA9 1300 aa6.67□□□□□ -1.34
AFP-201ENST00000226359 MYH1P12882 1939 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 TSPY2A6NKD2 308 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 TTLL1O95922 423 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 PCP11498 1178 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 CCL5P13501 91 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 EEF2P13639 858 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 GUCY1A2P33402 732 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 NT5C2P49902 561 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 JAG1P78504 1218 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 C6orf118Q5T5N4 469 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 MFSD14CQ5VZR4 134 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 LBX2Q6XYB7 198 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 DHX37Q8IY37 1157 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 ALKBH8Q96BT7 664 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 HTATIP2Q9BUP3 242 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 EPB41L4AQ9HCS5 686 aaPredicted RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 GABRQQ9UN88 632 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 POLIQ9UNA4 740 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 DDX60LQ5H9U9 1706 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 SLC15A5A6NIM6 579 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 ZBED4O75132 1171 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 SLC25A27O95847 323 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 CTSOP43234 321 aaPredicted RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 FGD1P98174 961 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 ARID5AQ03989 594 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 RBL2Q08999 1139 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 CCDC178Q5BJE1 867 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 CCDC129Q6ZRS4 1044 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 GPR142Q7Z601 462 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 SPICE1Q8N0Z3 855 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 TSEN34Q9BSV6 310 aaKnown RBP6.66□□□□□ -1.34
AFP-201ENST00000226359 MROH8Q9H579 483 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 CTNNA3Q9UI47 895 aa6.66□□□□□ -1.34
AFP-201ENST00000226359 SIPA1L1O43166 1804 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 ATAD5Q96QE3 1844 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 ZMYM6O95789 1325 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 PLIN4Q96Q06 1357 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 RANBP6O60518 1105 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 PRDM1O75626 825 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 TFRCP02786 760 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 CHGBP05060 677 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 GJB1P08034 283 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 XRCC5P13010 732 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 ELNP15502 786 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 CYP2B6P20813 491 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 CTGFP29279 349 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 GNA15P30679 374 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 GSK3AP49840 483 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 NMIQ13287 307 aaPredicted RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 BMS1Q14692 1282 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 TCEAL1Q15170 157 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 ALX1Q15699 326 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 RRP12Q5JTH9 1297 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 DPP9Q86TI2 863 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 JAZF1Q86VZ6 243 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 NCAPG2Q86XI2 1143 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 MCF2L2Q86YR7 1114 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 SEC62Q99442 399 aaKnown RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 SLF1Q9BQI6 1058 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.65□□□□□ -1.34
AFP-201ENST00000226359 POLMQ9NP87 494 aaPredicted RBP6.65□□□□□ -1.34
AFP-201ENST00000226359 CLIP2Q9UDT6 1046 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 FEM1BQ9UK73 627 aa6.65□□□□□ -1.34
AFP-201ENST00000226359 RAD50Q92878 1312 aa6.65□□□□□ -1.35
AFP-201ENST00000226359 SPINT1O43278 529 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 STRNO43815 780 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 MARCH6O60337 910 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 FARP2O94887 1054 aaPredicted RBP6.64□□□□□ -1.35
AFP-201ENST00000226359 BMP2P12643 396 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 SDSP20132 328 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 TFAP4Q01664 338 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 KCTD2Q14681 263 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 FAM83BQ5T0W9 1011 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 FAM160B2Q86V87 743 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 CLEC10AQ8IUN9 316 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 ZDHHC1Q8WTX9 485 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 CHURC1Q8WUH1 139 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 ATG4CQ96DT6 458 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 ZSCAN10Q96SZ4 725 aaPredicted RBP6.64□□□□□ -1.35
AFP-201ENST00000226359 SPATC1LQ9H0A9 340 aa6.64□□□□□ -1.35
AFP-201ENST00000226359 TXNRD2Q9NNW7 524 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms