RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 CERKLQ49MI3 558 aaPredicted RBP23.34■■□□□ 1.33
CCDC130-201ENST00000221554 IQCEQ6IPM2 695 aa23.34■■□□□ 1.33
CCDC130-201ENST00000221554 PANK4Q9NVE7 773 aa23.34■■□□□ 1.33
CCDC130-201ENST00000221554 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.33
CCDC130-201ENST00000221554 LCA5LO95447 670 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 FOSP01100 380 aaPredicted RBP23.33■■□□□ 1.33
CCDC130-201ENST00000221554 SLC1A4P43007 532 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 SMC1AQ14683 1233 aaKnown RBP23.33■■□□□ 1.33
CCDC130-201ENST00000221554 WDR93Q6P2C0 686 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 KCTD1Q719H9 257 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 KCTD17Q8N5Z5 321 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 DNAJC19Q96DA6 116 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 PCDHA1Q9Y5I3 950 aa23.33■■□□□ 1.33
CCDC130-201ENST00000221554 MYH4Q9Y623 1939 aa23.33■■□□□ 1.32
CCDC130-201ENST00000221554 SLC16A2P36021 539 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 COASYQ13057 564 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 FAM26FQ5R3K3 315 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 HAUS3Q68CZ6 603 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 SLFN13Q68D06 897 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 LRRC55Q6ZSA7 311 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 TMEM179Q6ZVK1 233 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 TRIM58Q8NG06 486 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 KCNMB3Q9NPA1 279 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 SYNPO2Q9UMS6 1093 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 PITPNM2Q9BZ72 1349 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 TRAF1Q13077 416 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 QRICH1Q2TAL8 776 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 BEND6Q5SZJ8 279 aaPredicted RBP23.32■■□□□ 1.32
CCDC130-201ENST00000221554 TATDN1Q6P1N9 297 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 PPP4R3CPQ6ZMV5 832 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 ERMNQ8TAM6 284 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 HPS3Q969F9 1004 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 NUDT12Q9BQG2 462 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 ACBD3Q9H3P7 528 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 COL4A3BPQ9Y5P4 624 aa23.32■■□□□ 1.32
CCDC130-201ENST00000221554 EEF2P13639 858 aaKnown RBP23.31■■□□□ 1.32
CCDC130-201ENST00000221554 KLK7P49862 253 aa23.31■■□□□ 1.32
CCDC130-201ENST00000221554 CLEC10AQ8IUN9 316 aa23.31■■□□□ 1.32
CCDC130-201ENST00000221554 GMCL1P1Q8NEA9 526 aa23.31■■□□□ 1.32
CCDC130-201ENST00000221554 NEK11Q8NG66 645 aa23.31■■□□□ 1.32
CCDC130-201ENST00000221554 SYN2Q92777 582 aaPredicted RBP23.31■■□□□ 1.32
CCDC130-201ENST00000221554 SECISBP2LQ93073 1101 aaKnown RBP23.31■■□□□ 1.32
CCDC130-201ENST00000221554 MMRN2Q9H8L6 949 aa23.31■■□□□ 1.32
CCDC130-201ENST00000221554 TACC1O75410 805 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 SASH3O75995 380 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 PRLRP16471 622 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 MARSP56192 900 aaKnown RBP23.3■■□□□ 1.32
CCDC130-201ENST00000221554 ZCWPW2Q504Y3 356 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 KCNK18Q7Z418 384 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 AMNQ9BXJ7 453 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 ANO3Q9BYT9 981 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 FAM184BQ9ULE4 1060 aa23.3■■□□□ 1.32
CCDC130-201ENST00000221554 SSU72P8A0A1W2PR75 194 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 TARSL2A2RTX5 802 aaKnown RBP23.29■■□□□ 1.32
CCDC130-201ENST00000221554 NFIAQ12857 509 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 CDC37Q16543 378 aaPredicted RBP23.29■■□□□ 1.32
CCDC130-201ENST00000221554 MAP9Q49MG5 647 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 TAF3Q5VWG9 929 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 GMCL1Q96IK5 515 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 DEF6Q9H4E7 631 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 TRIM10Q9UDY6 481 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 JRKLQ9Y4A0 524 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 PLA2G4BP0C869 781 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 Q4G0T1 1027 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 EEF2KMTQ96G04 330 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 MXD3Q9BW11 206 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 LUC7LQ9NQ29 371 aaKnown RBP23.29■■□□□ 1.32
CCDC130-201ENST00000221554 L1RE1Q9UN81 338 aa23.29■■□□□ 1.32
CCDC130-201ENST00000221554 MAPK8IP2Q13387 824 aaPredicted RBP23.28■■□□□ 1.32
CCDC130-201ENST00000221554 CCDC40Q4G0X9 1142 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 STYK1Q6J9G0 422 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 CACNA2D4Q7Z3S7 1137 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 C2CD5Q86YS7 1000 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 FAM20AQ96MK3 541 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 IFIH1Q9BYX4 1025 aaKnown RBP23.28■■□□□ 1.32
CCDC130-201ENST00000221554 KIAA1024Q9UPX6 916 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 PCDHA13Q9Y5I0 950 aa23.28■■□□□ 1.32
CCDC130-201ENST00000221554 CCDC66A2RUB6 948 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 TRAF5O00463 557 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ATP1A1P05023 1023 aaKnown RBP23.27■■□□□ 1.32
CCDC130-201ENST00000221554 USP14P54578 494 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ECM1Q16610 540 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 EDRF1Q3B7T1 1238 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 CCDC70Q6NSX1 233 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 PNKPQ96T60 521 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 DNAJC18Q9H819 358 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 CEP72Q9P209 647 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 MYH7BA7E2Y1 1941 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ENTPD3O75355 529 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 RHOXF2BP0C7M4 288 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 OAS2P29728 719 aaKnown RBP23.27■■□□□ 1.32
CCDC130-201ENST00000221554 MMP14P50281 582 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 KIF11P52732 1056 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ICA1Q05084 483 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ITIH3Q06033 890 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 RUBCNQ92622 972 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ALS2CR12Q96Q35 445 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 RHOXF2Q9BQY4 288 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 LACRTQ9GZZ8 138 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms